| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2493 |
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| Symbol | |
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| ID | 4018993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2971278 |
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| End bp | 2973629 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956521 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_563496 |
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| Protein GI | 91793845 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000146156 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAG AGCGTGAAGC GCATATCGAA CTCCCCGTGC TGCCACTGCG AGATGTGGTG
GTCTATCCCC ATATGGTTAT TCCGTTGTTT GTCGGCCGAG AAAAATCTAT TCGTTGCCTT
GAATCGGCCA TGGAGCAAGA CAAGCAAATT TTATTGGTCG CCCAGCGCGA TGCCGATTTA
GACGAACCAG GTAAAGACGA CATCTTCGAC ATAGGCACAG TGGCCTCTAT CTTGCAGTTG
CTTAAACTGC CCGATGGCAC AGTGAAAGTC TTGGTTGAAG GCGGTCAGAG AGCCAAAGTC
TTAAAGTACA CCCAAGAAGA CAGTTTCTTC GTTGCCACTG CCCAGTATTT AGAATCAGAA
GATCTTATCG AGAAAGAAGA AGAGGTCTTA GTTCGCAGTG CAATAAGTCA GTTTGAGGGT
TACATCAAGC TGAACAAAAA AATCCCTCCG GAAGTATTAA CCTCGCTTTC AGGAATAGAT
GAAGCTGCAC GCCTTGCCGA TACCATGGCG GCCCATATGC CGCTTAAGCT TGAAGACAAG
CAAGCCGTAC TTGAAATGAT CAATGTCGGT GAACGTCTTG AATACTTGAT GGCGATGATG
GAAGCGGAAA TTGACCTATT ACAGGTTGAA AAACGCATTC GTACTCGGGT CAAAAAGCAA
ATGGAGAAGA GTCAGCGTGA GTACTATTTG AATGAGCAAA TGAAAGCCAT TCAAAAAGAA
CTGGGCGACA TAGATGAAAG TCATGATGAA TTTGATGTTT TAGGCAAAAA AATTGAAGAA
GCTGGCATGC CAGCAGATGC CAAAGACAAG GCCAATGCCG AACTCAATAA ACTTAAGATG
ATGTCGCCAA TGTCGGCAGA AGCCACAGTG GTGCGCAGTT ATGTTGACTG GATGACGTCA
GTGCCTTGGA AAAAGCGCTC TAAAATTAAG CGCGATTTAG CCAAGGCCCA AGTGGTGCTG
GATACCGACC ACCACGGTCT TGAAAAAGTA AAAGACCGGA TTTTAGAGTA CTTGGCGGTG
CAGAGCCGGG TGCGTAAACT CAAAGGGCCA ATCTTGTGTT TAGTCGGACC ACCGGGTGTG
GGTAAAACCT CATTAGGTCA GTCTATTGCC AAAGCGACCG GCCGTGAATA TGTGCGGGTT
GCGCTAGGCG GCGTGCGTGA TGAGGCTGAA ATTCGTGGCC ATAGACGGAC TTATATTGGC
TCTATGCCTG GTAAAATCAT CCAGAAGATG GCCAAGGTTG GGGTGAAAAA CCCACTGTTT
TTGCTCGATG AAATCGATAA GATGAGCTCA GACATGCGCG GCGATCCGGC ATCGGCACTG
CTTGAGGTGT TAGATCCTGA GCAAAATGGC ACCTTTAACG ATCATTACCT CGAAGTCGAT
TATGACTTAT CGGATGTAAT GTTTGTGGCT ACCTCAAACT CTATGGATAT TCCAGGGCCC
TTATTGGACC GCATGGAAGT CATTCGTCTT TCTGGTTATA CCGAAGATGA AAAATTAAAT
ATTGCCAAAA AGCACTTACT TGAGAAACAA ATTGAGCGTA ACGGCTTGAA AGCCAAGGAA
GTGCATATCG ATGATAGCGC GATTTTGGGT ATTATTCGTT ATTACACTCG TGAAGCCGGT
GTGCGTTCTC TTGAACGTGA GCTTTCAAAA ATTTGCCGCA AAGTCGTTAA ACAGATTTTA
TTGGATAAAA GCGTTAAATC TGTGGTCATT AATCAAGACA ACCTGAAAAC CTTCTTAGGG
GTGCAGCGTT TTGATTACGG CAAAGCCGAG TCTAAGAACC AGATAGGTCA AGTGACAGCT
CTCGCCTGGA CCCAAGTGGG CGGGGATTTA CTCACTATAG AAGCGACGTC AGTGGCGGGT
AAAGGTAAGC TGGCTTATAC CGGTTCCTTA GGCGATGTGA TGCAAGAGTC TATTCAAGCG
GCCATGACGG TGGTGCGTGC TCGTGCAGAA CAATTGGGTA TCAATAACGA TTTCTATGAA
AAACGTGATA TCCATGTGCA TGTACCTGAA GGGGCGACGC CAAAAGACGG GCCTTCAGCG
GGCGCGGCTA TGTGTACCGC TTTAGTGTCT AGCCTTACTG GGAATCCAGT GCGCAGCGAT
GTTGCCATGA CAGGGGAAAT CACCCTACGT GGTGAGGTGT TGCCCATTGG CGGCCTAAAA
GAAAAATTGC TTGCAGCCCA TCGTGGCGGC ATTAAGCATG TGCTAATTCC TAAGGAAAAT
GAGCGTGACT TGGAAGAAAT TCCAGCTAAT GTTATCGCTG ATTTGCAAAT TCATCCGGTT
CGCTGGATTG ATGAAGTGCT TAAATTAGCA CTAGAAAAGC CGGTTGAAGG CTTTGAAGTG
GTTAAAAAGT AG
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| Protein sequence | MTEEREAHIE LPVLPLRDVV VYPHMVIPLF VGREKSIRCL ESAMEQDKQI LLVAQRDADL
DEPGKDDIFD IGTVASILQL LKLPDGTVKV LVEGGQRAKV LKYTQEDSFF VATAQYLESE
DLIEKEEEVL VRSAISQFEG YIKLNKKIPP EVLTSLSGID EAARLADTMA AHMPLKLEDK
QAVLEMINVG ERLEYLMAMM EAEIDLLQVE KRIRTRVKKQ MEKSQREYYL NEQMKAIQKE
LGDIDESHDE FDVLGKKIEE AGMPADAKDK ANAELNKLKM MSPMSAEATV VRSYVDWMTS
VPWKKRSKIK RDLAKAQVVL DTDHHGLEKV KDRILEYLAV QSRVRKLKGP ILCLVGPPGV
GKTSLGQSIA KATGREYVRV ALGGVRDEAE IRGHRRTYIG SMPGKIIQKM AKVGVKNPLF
LLDEIDKMSS DMRGDPASAL LEVLDPEQNG TFNDHYLEVD YDLSDVMFVA TSNSMDIPGP
LLDRMEVIRL SGYTEDEKLN IAKKHLLEKQ IERNGLKAKE VHIDDSAILG IIRYYTREAG
VRSLERELSK ICRKVVKQIL LDKSVKSVVI NQDNLKTFLG VQRFDYGKAE SKNQIGQVTA
LAWTQVGGDL LTIEATSVAG KGKLAYTGSL GDVMQESIQA AMTVVRARAE QLGINNDFYE
KRDIHVHVPE GATPKDGPSA GAAMCTALVS SLTGNPVRSD VAMTGEITLR GEVLPIGGLK
EKLLAAHRGG IKHVLIPKEN ERDLEEIPAN VIADLQIHPV RWIDEVLKLA LEKPVEGFEV
VKK
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