Gene Sden_2491 details

Gene Information

• Locus tag: Sden_2491
• ID: 4018991
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 2968670
• End bp: 2970547
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637956519
• Product: PpiC-type peptidyl-prolyl cis-trans isomerase
• Protein accession: YP_563494
• Protein GI: 91793843
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0760] Parvulin-like peptidyl-prolyl isomerase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.873203
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAGAGA AAATTCGCGA AGGTTCACAA GGCGTTGTAG CCAAAGGCAT TTTAGTGCTT 
GTGATATTCT CCTTTGCTTT TGCTGGTGTC AGCAGTTATT TGGGAACTTC AACGGATTTG 
CCCGTCGCCA TAGTTAATGG TGATGAAGTA TCTACCAGTG AATTAGAACA AGCATTCCAA 
AACGAGCGCA GCCGTATCGA GCAGCAATTA GGTGACATGT TTGAAACCTT AGCCGCTGAT 
GATACTTATA TGGCTGGGAT TAAGCAGAGC GTGTTAGAAA AATTGGTTGG TGACAAGCTC 
ATCGATCAAG CCGCCTTTGC GTTAGGCCTG CGCGTGTCGG ATGAACAAAT TAAACAAGCC 
ATCGTCTCTG AGCCTGCGTT TCAGACTGAC GGTGTATTTG ACAATAGCCG TTATCAAGCG 
GTATTGCGTC AATTAGGCTA TCAAGCGGTG AGCTTTAAAA ACATGATGCG GGTTGATATG 
ACTCGTCGTC AGTTATTGTC TGCGTTAGTG GGCAGTGAGT TTGCACTCGA TGGCGAAGCT 
AAGCAGCTGG CTGAAGTACA AGGTCAGACC CGTGATATTC GTTACTTAAC CGTTGAGTCA 
AACCAGTTTT TAGCTGATAA CTCTGTCACA GATGAAGAAG CGCAAGCTTA TTATGATGCC 
AATCAATCTC AGTATTTAAG CCCTGAGAAA GTGAGCCTTG AATATCTTGA GCTGAATGTG 
GCTGAACTTG CCAAAGACAT AACAACTTCA CCTGAAGAAG TAAAAGCCTA TTACGACGAG 
CATCAAAAAC AGTATCAGAC GGCTGAAAAG CGCCTTGCGG CACATATTCT GATCAATAAA 
TCCGATGACG ATGCAGCCGA TGAAGCTAAA GCGGCGGCTA TTCTGGCTAA GTTAACCGCA 
GGGGAGAGTT TTGAAGCCCT AGCTAAGACT GACTCAGAAG ATAAGTTTAG CGGTGAACAA 
GGCGGGAAAC TTGATTGGTT TGAGCCTGGC GTGATGGCCC CAGCCTTCGA TGAGGCATTA 
TTCTCACTAG AGAAAGGTGC TCATTCAGGT TTAGTGAGTA CAGAATTTGG TTATCACATC 
ATTAAGCTTT TAGATGTGCA AGCAGGGCAG TTAGCTCCTT TTGCTGATGT TGAAGCTAAG 
ATTGTTGCTC AAATTCAAGA GAAAAAAGCC TTAGACAAGT TCTACGGTTT ACAAACCAAG 
CTTGCCGATA CCAGTTATGA AATCCCAGAT ACCTTAGTGG ACGCGGCGAA GGCCATTGGT 
GCTAGCATCA AGACCACTGA GTTATTCGAT CGTAACGCTG TGCCTGCGGA ATTTAATCAG 
GCTGATTTTA TTAAAGCGGC ATTTTCCGAT CAAGTATTGG CTAGCGGCAT GAACAGTGAT 
GTTATCGAAA TCGCCCCGAA TCACATACTT GTGGTGCGTA TGAAAGAGCA TCAAGCTGCC 
GGAACTTTGA GTTTTTCAAG TGTAAAAGAC AGCATTATCG CACGTTTACA ACAAGATAAA 
GCTAAAGAAG CAGCCCTTAA CAAAGCTGTG GAGTACATGG CTCAACTTAA AGACAGCACT 
TTCGATGCTT CAAGCTTAAG TTTAACCACT CAGGCTAAGC TTGGCCGTTA TAGCCAAGAT 
GTCGACAGCG GCATAGCGGC GAAAGCGTTC CAGATGCCGG TACCTGCAAA GGATGCTGTT 
AGCATAGATA CCGCTGAGCT AGCTTCTGGT TATGCCATCA TACTGTTGGA TAAGGTTAAC 
CCAGCCGAAG GCATTAACGA CAATGTATTA AGTGCGATGA AACAGAGATT AACGCCTCAG 
TACAGCGAAG CTGACTATCG TGGTTTAATC GCCTCGTTAA AAGCCAAAGC CGATATAGAA 
TACCCAGTGG CTGAATAA 

 

Protein sequence

MLEKIREGSQ GVVAKGILVL VIFSFAFAGV SSYLGTSTDL PVAIVNGDEV STSELEQAFQ 
NERSRIEQQL GDMFETLAAD DTYMAGIKQS VLEKLVGDKL IDQAAFALGL RVSDEQIKQA 
IVSEPAFQTD GVFDNSRYQA VLRQLGYQAV SFKNMMRVDM TRRQLLSALV GSEFALDGEA 
KQLAEVQGQT RDIRYLTVES NQFLADNSVT DEEAQAYYDA NQSQYLSPEK VSLEYLELNV 
AELAKDITTS PEEVKAYYDE HQKQYQTAEK RLAAHILINK SDDDAADEAK AAAILAKLTA 
GESFEALAKT DSEDKFSGEQ GGKLDWFEPG VMAPAFDEAL FSLEKGAHSG LVSTEFGYHI 
IKLLDVQAGQ LAPFADVEAK IVAQIQEKKA LDKFYGLQTK LADTSYEIPD TLVDAAKAIG 
ASIKTTELFD RNAVPAEFNQ ADFIKAAFSD QVLASGMNSD VIEIAPNHIL VVRMKEHQAA 
GTLSFSSVKD SIIARLQQDK AKEAALNKAV EYMAQLKDST FDASSLSLTT QAKLGRYSQD 
VDSGIAAKAF QMPVPAKDAV SIDTAELASG YAIILLDKVN PAEGINDNVL SAMKQRLTPQ 
YSEADYRGLI ASLKAKADIE YPVAE