| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2470 |
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| Symbol | rlmL |
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| ID | 4018970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2945387 |
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| End bp | 2947522 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956498 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_563473 |
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| Protein GI | 91793822 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000238626 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATT TTTTTGCTGC GGCCCCCAAG GGCTTCGAAT ATAGCTTAGC CAATGAACTC
ACCGAGTTTG GCGCTACCGA TGTGAAAGAG AGTGTGGCGG GCGTTTACTT CTCATCCTCT
CTTGAACTTG CCTACCGCAT TACGCTGTGG ACACGCCTTG CGAGCCGTAT CGTTGTTGTC
ATCTATAAAG GTCCCTGTGA ATCTCCTGAG CAGTTATACA ACGCTGCCTA TTGCATTGAC
TGGCCGTCGC ATTTCTCCAA TAAGAAAACC TTCAGTATCG ATTTTCATGG TACTGGCGGC
TTCATTAATA ATACTCAGTT TGGCGCCTTG AAGATAAAAG ATGCTGTCGT TGACCGTTTT
CGTGATGATG GCGATGCCCG TCCGAACGTT GAGCGTGTCG ATGCTGAGTT TAGAGTCGAT
GCCCACTATC GCAATGGTCA ATTGACTATA TCGGTAAACT TCTCCGGCCC GTCTCTACAT
CAGCGTGGCT ACCGTTCCAC CACAGGTGAA GCACCGCTTA AAGAGAATTT AGCGGCGAAT
ATGTTGGTCC GAAGTGGCTG GCAGGCTGAA CAAGTGGATT TACTCGATCC ATTTTGCGGT
AGCGGCACAG TATTAATTGA AGCGGCGCTA ATGGCTTGCG ATATCGCCCC AGGGCTTAAA
CGTCAACGCT TTGGTTTTGA AAGCTGGCGC CAGCACAATG CCACTATGTG GAATAAGGTG
TTAGAAGAGG CTCACGCCCG CGCCAGTTTA GGCCGCACTC GTTGTAAGGT TAAATTCTAT
GGCTCAGACA TCGACCCTCG TATGGTGAGC CTTGCTAAAC GTAACGCCGA GAACGCAGGC
GTCGATGAGT TGATTGAATT TAGCGAGATG GATGCGTTAA ACGTCAAAGT GCCGTGCGAA
ACAGGCTTTA TGATTTCAAA CCCACCTTAT GGTGAGCGTC TAGGTAACAT TACCGAACTA
TTGCAACTTT ACTATCAGTT TGGTGACAAA TTAAAGCAAG ATTTTGGCGG CTGGAAAGTC
GCCATGTTAT GCAGTGACGT TGAGCTAATT TCATCATTAA AGCTTAAAGC CGACAAGCAG
ATGAAGATGT TTAACGGCGC GCTTGAATGT GCCTTTAATC TTTATACCTT GCATGCCAAC
AGCACCCGCC GTGATGCCCC CGTATTGCCA GAAGGTGTGG ATGACATCGC CGATATTGCG
CCAGCATTTG CTAACCGCAT TAAGAAAAAC GTTAAGACAT TAGGTAAGTG GGCCAAGAAA
GAAGGCATCG ACAGCTACCG TTTATATGAT GCTGACTTAC CTGAATACAA TGTTGCCATC
GATAAGTACG TGGATTACGT GGTAATTCAA GAATACAGTG CGCCAGCGAC AATTCCTGAA
GCGGTTACCA AGCGCCGTTT AAGCGATGTA CTGTTAGCCC TGCCTAATGC CTTAGGTATA
CACCCAGATA AAATCACCCT AAAGACCCGT GAGCGTCAAA AGGGCACTAA TCAATACCAG
AAGCTTGCTG AGAAAAAACT TGAAATTATC ACCCAAGAAT ACGGCGCTAA ATTTAAGCTT
AACCTCACAG GTTACTTAGA CACTGGGCTG TTTTTAGATC ACAGGGTGAC ACGAAAGCTG
GTTGGCGAAA AAGCCAAAGG CCGTAAGGTA CTTAACTTAT TCTCTTATAC TGGCTCTGCA
TCTGTACATG CAGCCCTTGG TGGCGCCAAA AGCGTGACCA CGGTCGATAT GTCAAATACC
TATATCAGCT GGGCGAAAGA AAACTTTGAG CTTAACGGTA TTAATCTTAA AAACCATGAG
TTTGTGCAAG CCGATTGTTT GCAGTGGGTT GATGATTGCC GCGAGCAATT TGACCTTATT
TTTATTGATC CACCGACCTT CTCCAATTCA AAACGCATGG AAGACAGCTG GGATGTACAG
CGTGACCATG TGGCGTTATT AGGCAAACTT ATCAAGCTAT TAAGCCCTAA AGGTGAGCTG
ATATTTTCTA ATAACAAACG TAAGTTTAAG ATGGATATTG AGGCATTAAC TGCCTTGGGC
GCGACGGTAA ACAATATTGA CGAACTCTGT TTGCCACTGG ATTATAAACG CAATCCCCAT
ATCCATAACG TGTGGTTGTT GACCCATGGC AAGTGA
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| Protein sequence | MFNFFAAAPK GFEYSLANEL TEFGATDVKE SVAGVYFSSS LELAYRITLW TRLASRIVVV
IYKGPCESPE QLYNAAYCID WPSHFSNKKT FSIDFHGTGG FINNTQFGAL KIKDAVVDRF
RDDGDARPNV ERVDAEFRVD AHYRNGQLTI SVNFSGPSLH QRGYRSTTGE APLKENLAAN
MLVRSGWQAE QVDLLDPFCG SGTVLIEAAL MACDIAPGLK RQRFGFESWR QHNATMWNKV
LEEAHARASL GRTRCKVKFY GSDIDPRMVS LAKRNAENAG VDELIEFSEM DALNVKVPCE
TGFMISNPPY GERLGNITEL LQLYYQFGDK LKQDFGGWKV AMLCSDVELI SSLKLKADKQ
MKMFNGALEC AFNLYTLHAN STRRDAPVLP EGVDDIADIA PAFANRIKKN VKTLGKWAKK
EGIDSYRLYD ADLPEYNVAI DKYVDYVVIQ EYSAPATIPE AVTKRRLSDV LLALPNALGI
HPDKITLKTR ERQKGTNQYQ KLAEKKLEII TQEYGAKFKL NLTGYLDTGL FLDHRVTRKL
VGEKAKGRKV LNLFSYTGSA SVHAALGGAK SVTTVDMSNT YISWAKENFE LNGINLKNHE
FVQADCLQWV DDCREQFDLI FIDPPTFSNS KRMEDSWDVQ RDHVALLGKL IKLLSPKGEL
IFSNNKRKFK MDIEALTALG ATVNNIDELC LPLDYKRNPH IHNVWLLTHG K
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