| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2464 |
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| Symbol | |
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| ID | 4018964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2938391 |
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| End bp | 2940190 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956492 |
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| Product | ATP-dependent protease |
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| Protein accession | YP_563467 |
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| Protein GI | 91793816 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000127268 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAA CCTTACTCTC AACGACTTCA GAAACGACTC AGCTTATTCT CCCAACCGCA
CTTGCTGCGG CTAAGTTGGC GCCACAATAT TCCTTGCCCA GCACCCTTAA TACAAGTGTG
GCACTTAGTG CAATTTTATT AGGCCAAGAG CGAGCCGTGA ATGCCTTCAA GTTAATGACT
AAGGTTGCAA ACCAACATTT ATTTGTGGCC GATTTCATTG GCGTTGACCG CAGCTTATTG
ATAGATGCCT TGATGACACA AAAGCCTGAG CCTATCACTC AGTATCTTGT GGCCTCTAAA
GCGACTGATT ACCCCACTGA AGTGCAATTT CGTTGGCAAA GCGCCCTTCC CCATGAACAA
GTGGGCATAA TGGCAAGCCA AGACACCTCG GCCTGCTATT TATCTGGGCC TATTCGCCGT
GTCGATCTGT TAGGTAAAAT GCTTAAGACG GATAAAAATA GCCAATATAA GGTGGGTGCC
TTAGGCAAAC ATCATTATGT ATTTATCTGC GCTGAATCAT TGTGGAAACG TGAGGGCCTC
TGGGAACTGC TTATGCAAAT CCTTAGAGAA AAGCAGTATC GTATTGCTCA TGACATCGCC
CCCGTTCCGC TGAATTGTAA AATAGTATTG ATAGGTTCAG GGCATTTCTA TAGCCAACTC
AGAGGCGAAG ACAGGCAATT TATGGAGCAC TTTCCTTTGC TTGCTGAGCT CAGTAATGAG
CTGGATCTCA CTAAATACAC CGAAAGCCAA TATTGCCAAT ATTTGATGGC CCTTGCCCAA
AATCAAGCAG TCACCTTAGA GGCATCGAGT TTATTACCCC TGTTTTGGTA TAGTGCCCGC
CTGACAGAGC ATCAACAGCG TCTGAGCCTG TCCATGCTGC AACTGTCTCA ACTTATGGCT
CAGGCCAAGG CCTATCGACC CAGTACGACT TCTGAGCTCA CCAAAGGGCT CACAGCTCAA
TGTGTGGCTA GGGCATTAAC TCAGCTTAAG TTTCGCCATG ACAGCTCCGA GTTTTTCTCG
GCGCAAAGTT TCGATGATAA TTTTATCCAT CTCCCCACCA CAGGTGCGAT GGTGGGTCAG
ATTAACGCTC TCACTGTTAT TGATAGTGGT GATTACAGTT ATGGAGAGCC TGCTAGGATC
ACCACCACAG TGCATTATGG TGACGGTGAA GTCGCTGACA TAGAAAGAAA GTCAGAGCTT
GGCGGCAACA TTCACACTAA AGGTATGATG ATCCTTTCTG CGTGCCTATA CCGAATTTTT
GGTCGCGACG CCCCGCTTCA TCTTAATGCC AGCATAGTGT TCGAGCAGTC TTATCAAGAA
ATTGATGGCG ATAGCGCTTC GCTCGCCGAA TATTGCTGCT TAATGTCGGC CATCGCCGAG
CAACCTATTA TTCAATCTTT AGCCGTAACA GGCGCCTTAG ATCAATTTGG CAATGTACAA
GCCATTGGCG GTGTCAATGA AAAAATCGAA GGCTTCTTTG CGTTATGCCA ACGTCGAGGC
TTAACGGGCG AGCAAGGGGT CATCATCCCC AAGACCAATA TATTACAACT CAATCTCGCC
CCCGAAGTGA TTAATGCGGT GCAAAAGGGG CAATTCCACA TTTATGGCAT CAGCCATATG
GATGAAGCCG TTGAATTGTT AATGCAGGTC TATGCAGGTG TTGCCGATGA AGATAATGAC
TTCCCTGCCG AATCTCTCTA TGGCTTGGTT CAGCAAAGGC TAGATAAAAT GGCCGGACAC
GATGAGATCT CAATCGGGTT TTGGACTAAA TTAATGTTGA AACTCAGACT TTCACAGTGA
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| Protein sequence | MNSTLLSTTS ETTQLILPTA LAAAKLAPQY SLPSTLNTSV ALSAILLGQE RAVNAFKLMT
KVANQHLFVA DFIGVDRSLL IDALMTQKPE PITQYLVASK ATDYPTEVQF RWQSALPHEQ
VGIMASQDTS ACYLSGPIRR VDLLGKMLKT DKNSQYKVGA LGKHHYVFIC AESLWKREGL
WELLMQILRE KQYRIAHDIA PVPLNCKIVL IGSGHFYSQL RGEDRQFMEH FPLLAELSNE
LDLTKYTESQ YCQYLMALAQ NQAVTLEASS LLPLFWYSAR LTEHQQRLSL SMLQLSQLMA
QAKAYRPSTT SELTKGLTAQ CVARALTQLK FRHDSSEFFS AQSFDDNFIH LPTTGAMVGQ
INALTVIDSG DYSYGEPARI TTTVHYGDGE VADIERKSEL GGNIHTKGMM ILSACLYRIF
GRDAPLHLNA SIVFEQSYQE IDGDSASLAE YCCLMSAIAE QPIIQSLAVT GALDQFGNVQ
AIGGVNEKIE GFFALCQRRG LTGEQGVIIP KTNILQLNLA PEVINAVQKG QFHIYGISHM
DEAVELLMQV YAGVADEDND FPAESLYGLV QQRLDKMAGH DEISIGFWTK LMLKLRLSQ
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