Gene Sden_2430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2430 
Symbol 
ID4018928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2895243 
End bp2896013 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content49% 
IMG OID637956457 
Producthypothetical protein 
Protein accessionYP_563433 
Protein GI91793782 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATTGT TATTAGAACC TAGCCATTGG GCCATGTTGG CATTAGTCGG CCTGTTTGCA 
GGGTTTATTG ATGCCGTGGT TGGCGGTGGT GGACTGTTAT CTATCCCCGC GTTATTGACC
ATAGGCATGC CGCCCCATAT TGCCCTTGGC ACTAATAAAC TGGCCGCATG CTTTGGATCA
TTTACCGCTA GCCTCACCTA TTATAAGCAG CAGCTGTTTG TACCCTCATT CTGGTATCAC
AGTCTTGGGG CGACATTCAT CGGTGCCATC ATTGGCACGC TAGCAGTATT TCTTGTTGAC
TCCCAATGGC TTGAGAAAAT CTTGCCCATA CTTATCATAG GCATCGCCCT TTACACTTTA
GTCAGCCCTA AAGTCATGGA TGCAAGTCAA CAGGCACCTA AAATGCCAAG CTCAGCGGCA
AAACAGTGGA CGCAAGGTTT AGGCTTAGGG GCATATGACG GTTTCGCAGG CCCAGGCATT
GGCGCTTTTT GGACCTTATC CTCTATCAAA CTGCACAAGT TACCTTTGCT CAATAGCTGT
GGTCTAGCGC GAGCCATGAC GTCCATCAGT AATGCGACCG CACTAATATT GTTTGCCGCG
TTAGGTCAGG TGCATTGGTT GCTCGGCCTT TGGATAGGCA TTTGCATGAT GGTAGGCGCT
TACATTGGCG CCCATTCAGC CATTCGCTTC GGGGTGCCAT TTATTAAACC CTTGTTTATT
ATTATGGTAC TCGCCATGGG CGCAAACCTT ACATGGACGG CATGGCAATG A
 
Protein sequence
MELLLEPSHW AMLALVGLFA GFIDAVVGGG GLLSIPALLT IGMPPHIALG TNKLAACFGS 
FTASLTYYKQ QLFVPSFWYH SLGATFIGAI IGTLAVFLVD SQWLEKILPI LIIGIALYTL
VSPKVMDASQ QAPKMPSSAA KQWTQGLGLG AYDGFAGPGI GAFWTLSSIK LHKLPLLNSC
GLARAMTSIS NATALILFAA LGQVHWLLGL WIGICMMVGA YIGAHSAIRF GVPFIKPLFI
IMVLAMGANL TWTAWQ