Gene Sden_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2429 
SymboldinG 
ID4018927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2893152 
End bp2895227 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content47% 
IMG OID637956456 
ProductATP-dependent DNA helicase DinG 
Protein accessionYP_563432 
Protein GI91793781 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATCGG ATAAGATAAA GACCCAGATC CGCACCATTT ATAAAGGCAT AGCCACGGCT 
ATGCCTCAAT TTCGCTCACG ACGCGAGCAA AACTTCATGG TGGCCGAGAT CTCTAAAACC
TTAGCCGGTG AGTATGATAA AGACAGGCGC ATTATAGTGG TTGAAGCCGG TACGGGTATT
GGTAAGTCGT TATCTTATCT GCTTGGCAGC ATACCGCTGG CTGTAGGTAA CAAGAAGAAA
GTCTGTATCG CCACCGCCAC AGTCGCACTG CAAGAGCAGC TGCTTCATAA AGACTTGCCG
TTCTTTTTAG CCAATTCAGC TATCGATTTT AAATTTGGCT TAGTCAAGGG TCGCCAACGC
TATGTGTGCT TGGCCAAACT CGAGGCCATG CTAGGCAATC AAGACGGCGC GCAAATGGCC
ATGTGGCAAA CCAAGCCAGA TAAAAGCCAA GTGGAAGCTT TAGGCCAGTT ACACGAGGAT
TATCATAAGA AGCGCTGGAA TGGTGAGCTC GATACCCTTA AAACCCCTAT CCCAGACTTT
TTATGGCAGC AAGTTTGCTG TGATAAACAC AGCTGCCATC GCCAAGTGGC AAGCCATCAT
AACTGCCCTT TTCATAAGGC GCGGGAAGAT GTAGAAACCT GGGACGTACT TATCGTCAAC
CACAGCCTAT TGTTTGCGGA CTTAGAGTTA GGCGGCGGCG TTATCTTGCC AGATCCCGAA
GACATGTTTT ATGTCATCGA TGAGGCCCAC CATTTACCCA TAGTCGCAAG GGACTTTTCC
AGCGCACAGG CTACCTTAAG AGGCGCCAGC GATTGGTTAG ATAAAGCGTC AAAGACCTGT
AGCAAGCTGC AAAACCAGCT CAAAACCACG CATATCATTG CGCCAGTACA AGCCATGCTG
GATCATATTT CAGAGCTCAT TGCTTTGCTC AATCAAGTGG CGCATTTTTG TGATACTCAG
CCGCAACAAT TTGCCAATCC TGAAGTAAGA ATGCGTTTCG AGCACGGTAA ATTACCCCAA
GCCTTACTTA TTCAAGCAGA AAACTTAGCC ATTGCGGCCA ATCAAGGGCT AAAGCAATTC
ACTAAAATCC AATCTGTGCT CAGTGAGGCC ATTAAAGATG GGGAAGTGCC CAAACATCAA
GCCGAAGCCT TGTTGTCAGA AACGGGTTTC ATTTTGCAAC GTTTAGAAAA TCTGCAAAAG
CTGTGGAAGA TGATGGCGAA AGAAGACAGC AGCAAAGGCG CCCCCATGGC CAGATGGGCC
GAGCTCATCA CAGGCAAGCA GCAAGATTAC TTATTTTGCG CCTCCCCCAT CGAAGTCGGT
TTTATGCTTG AGTCCATGTT GTGGCAAAAA GCCGCCGGTG TGGTACTTTG CAGCGCAACC
TTAAGGGCAT TGAATAATTT TAACCATTTT GCCCACCAAG TGGGCTTAAG TATCAATGAT
GGGAGCCGTT TTTTGGCTTT GCAATCCCCC TTTGATTATG AAAACAACGC CACTTTATTT
ATCCCTAAGA TGCGCAACGA GCCCACGGAT GATGACTACA CCCAAGAGTT AGCCGAACAA
ATTCTTGCGC TAATTGAAGG CGAGATGGCA AGTTTAGTGT TGTTTGCCTC TTATTGGCAG
ATGGAGAAAG TGGCCGAAAT CGTCGAGAAA AAACTCGCCA AGGATGAGTT ATTCATTCAA
GGCACCGCCC CAAGACAGCA GATACTCGAG CAACATAAAG CCCGCTGCGA TCAAAACCTG
CCCAGTATTA TTTTCGGTAC CGGCAGTTTC TCAGAAGGGT TAGACTTGCC AGGCGACTAC
TTAACCAATT TGATCATCAC TAAACTGCCC TTTGCCGTGC CCACCTCTCC GGTGGAGCAA
GCTCATGCCG AATACATTAA AATTAAAGGC GGTAATCCTT TCATGCAGCT CACCATACCG
GATGCTTCAA GAAAATTGAT CCAAAGTTGT GGTAGATTAC TGCGCAAAGA GCAAGACTAT
GGCCGAGTCA CTATCTTAGA TAGACGCCTA GTGACCAAAC GATATGGTCA ATCACTGATA
GATGCGCTAC CTCCTTTTCG CCGTGTCATT GAATAA
 
Protein sequence
MLSDKIKTQI RTIYKGIATA MPQFRSRREQ NFMVAEISKT LAGEYDKDRR IIVVEAGTGI 
GKSLSYLLGS IPLAVGNKKK VCIATATVAL QEQLLHKDLP FFLANSAIDF KFGLVKGRQR
YVCLAKLEAM LGNQDGAQMA MWQTKPDKSQ VEALGQLHED YHKKRWNGEL DTLKTPIPDF
LWQQVCCDKH SCHRQVASHH NCPFHKARED VETWDVLIVN HSLLFADLEL GGGVILPDPE
DMFYVIDEAH HLPIVARDFS SAQATLRGAS DWLDKASKTC SKLQNQLKTT HIIAPVQAML
DHISELIALL NQVAHFCDTQ PQQFANPEVR MRFEHGKLPQ ALLIQAENLA IAANQGLKQF
TKIQSVLSEA IKDGEVPKHQ AEALLSETGF ILQRLENLQK LWKMMAKEDS SKGAPMARWA
ELITGKQQDY LFCASPIEVG FMLESMLWQK AAGVVLCSAT LRALNNFNHF AHQVGLSIND
GSRFLALQSP FDYENNATLF IPKMRNEPTD DDYTQELAEQ ILALIEGEMA SLVLFASYWQ
MEKVAEIVEK KLAKDELFIQ GTAPRQQILE QHKARCDQNL PSIIFGTGSF SEGLDLPGDY
LTNLIITKLP FAVPTSPVEQ AHAEYIKIKG GNPFMQLTIP DASRKLIQSC GRLLRKEQDY
GRVTILDRRL VTKRYGQSLI DALPPFRRVI E