Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2429 |
Symbol | dinG |
ID | 4018927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2893152 |
End bp | 2895227 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637956456 |
Product | ATP-dependent DNA helicase DinG |
Protein accession | YP_563432 |
Protein GI | 91793781 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTATCGG ATAAGATAAA GACCCAGATC CGCACCATTT ATAAAGGCAT AGCCACGGCT ATGCCTCAAT TTCGCTCACG ACGCGAGCAA AACTTCATGG TGGCCGAGAT CTCTAAAACC TTAGCCGGTG AGTATGATAA AGACAGGCGC ATTATAGTGG TTGAAGCCGG TACGGGTATT GGTAAGTCGT TATCTTATCT GCTTGGCAGC ATACCGCTGG CTGTAGGTAA CAAGAAGAAA GTCTGTATCG CCACCGCCAC AGTCGCACTG CAAGAGCAGC TGCTTCATAA AGACTTGCCG TTCTTTTTAG CCAATTCAGC TATCGATTTT AAATTTGGCT TAGTCAAGGG TCGCCAACGC TATGTGTGCT TGGCCAAACT CGAGGCCATG CTAGGCAATC AAGACGGCGC GCAAATGGCC ATGTGGCAAA CCAAGCCAGA TAAAAGCCAA GTGGAAGCTT TAGGCCAGTT ACACGAGGAT TATCATAAGA AGCGCTGGAA TGGTGAGCTC GATACCCTTA AAACCCCTAT CCCAGACTTT TTATGGCAGC AAGTTTGCTG TGATAAACAC AGCTGCCATC GCCAAGTGGC AAGCCATCAT AACTGCCCTT TTCATAAGGC GCGGGAAGAT GTAGAAACCT GGGACGTACT TATCGTCAAC CACAGCCTAT TGTTTGCGGA CTTAGAGTTA GGCGGCGGCG TTATCTTGCC AGATCCCGAA GACATGTTTT ATGTCATCGA TGAGGCCCAC CATTTACCCA TAGTCGCAAG GGACTTTTCC AGCGCACAGG CTACCTTAAG AGGCGCCAGC GATTGGTTAG ATAAAGCGTC AAAGACCTGT AGCAAGCTGC AAAACCAGCT CAAAACCACG CATATCATTG CGCCAGTACA AGCCATGCTG GATCATATTT CAGAGCTCAT TGCTTTGCTC AATCAAGTGG CGCATTTTTG TGATACTCAG CCGCAACAAT TTGCCAATCC TGAAGTAAGA ATGCGTTTCG AGCACGGTAA ATTACCCCAA GCCTTACTTA TTCAAGCAGA AAACTTAGCC ATTGCGGCCA ATCAAGGGCT AAAGCAATTC ACTAAAATCC AATCTGTGCT CAGTGAGGCC ATTAAAGATG GGGAAGTGCC CAAACATCAA GCCGAAGCCT TGTTGTCAGA AACGGGTTTC ATTTTGCAAC GTTTAGAAAA TCTGCAAAAG CTGTGGAAGA TGATGGCGAA AGAAGACAGC AGCAAAGGCG CCCCCATGGC CAGATGGGCC GAGCTCATCA CAGGCAAGCA GCAAGATTAC TTATTTTGCG CCTCCCCCAT CGAAGTCGGT TTTATGCTTG AGTCCATGTT GTGGCAAAAA GCCGCCGGTG TGGTACTTTG CAGCGCAACC TTAAGGGCAT TGAATAATTT TAACCATTTT GCCCACCAAG TGGGCTTAAG TATCAATGAT GGGAGCCGTT TTTTGGCTTT GCAATCCCCC TTTGATTATG AAAACAACGC CACTTTATTT ATCCCTAAGA TGCGCAACGA GCCCACGGAT GATGACTACA CCCAAGAGTT AGCCGAACAA ATTCTTGCGC TAATTGAAGG CGAGATGGCA AGTTTAGTGT TGTTTGCCTC TTATTGGCAG ATGGAGAAAG TGGCCGAAAT CGTCGAGAAA AAACTCGCCA AGGATGAGTT ATTCATTCAA GGCACCGCCC CAAGACAGCA GATACTCGAG CAACATAAAG CCCGCTGCGA TCAAAACCTG CCCAGTATTA TTTTCGGTAC CGGCAGTTTC TCAGAAGGGT TAGACTTGCC AGGCGACTAC TTAACCAATT TGATCATCAC TAAACTGCCC TTTGCCGTGC CCACCTCTCC GGTGGAGCAA GCTCATGCCG AATACATTAA AATTAAAGGC GGTAATCCTT TCATGCAGCT CACCATACCG GATGCTTCAA GAAAATTGAT CCAAAGTTGT GGTAGATTAC TGCGCAAAGA GCAAGACTAT GGCCGAGTCA CTATCTTAGA TAGACGCCTA GTGACCAAAC GATATGGTCA ATCACTGATA GATGCGCTAC CTCCTTTTCG CCGTGTCATT GAATAA
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Protein sequence | MLSDKIKTQI RTIYKGIATA MPQFRSRREQ NFMVAEISKT LAGEYDKDRR IIVVEAGTGI GKSLSYLLGS IPLAVGNKKK VCIATATVAL QEQLLHKDLP FFLANSAIDF KFGLVKGRQR YVCLAKLEAM LGNQDGAQMA MWQTKPDKSQ VEALGQLHED YHKKRWNGEL DTLKTPIPDF LWQQVCCDKH SCHRQVASHH NCPFHKARED VETWDVLIVN HSLLFADLEL GGGVILPDPE DMFYVIDEAH HLPIVARDFS SAQATLRGAS DWLDKASKTC SKLQNQLKTT HIIAPVQAML DHISELIALL NQVAHFCDTQ PQQFANPEVR MRFEHGKLPQ ALLIQAENLA IAANQGLKQF TKIQSVLSEA IKDGEVPKHQ AEALLSETGF ILQRLENLQK LWKMMAKEDS SKGAPMARWA ELITGKQQDY LFCASPIEVG FMLESMLWQK AAGVVLCSAT LRALNNFNHF AHQVGLSIND GSRFLALQSP FDYENNATLF IPKMRNEPTD DDYTQELAEQ ILALIEGEMA SLVLFASYWQ MEKVAEIVEK KLAKDELFIQ GTAPRQQILE QHKARCDQNL PSIIFGTGSF SEGLDLPGDY LTNLIITKLP FAVPTSPVEQ AHAEYIKIKG GNPFMQLTIP DASRKLIQSC GRLLRKEQDY GRVTILDRRL VTKRYGQSLI DALPPFRRVI E
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