| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2428 |
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| Symbol | |
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| ID | 4018926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2890399 |
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| End bp | 2892864 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956455 |
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| Product | DNA polymerase II |
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| Protein accession | YP_563431 |
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| Protein GI | 91793780 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.124227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCTC AAGCACTCTC TAGCGTGAAA GGCCGTATTC TCACTCGCCA TACCTTGTAT
CGTGAGGGGC GAACTGTGCT GCAGTATTTT ATTAAGACGC AGCAAGGCCC TGCGCTTATT
GAATTAGATA ACGCCGAAGT GATTTGTTTT TGCCGGCAAA CGGATCTACA AACATTAGAA
CAATTGTTAG CGGGGCAGCT CTATGGCCAG TATCGGTTAG CTAATATTAA GCTTAAAAGC
TTTCATCATG AGCCACTTGC TTGCATTTAC TTAAACACAG TCAAGCAGCT TAGGCTGGTT
ATTCGTATCG CACAGGATAG AGGCATACCG CTATTTGAAA GCGATATTAA AACTGAGCAG
CGCTTTTTAA TTGAACGTTT CATTGCATTA GACGCAGAGT TCTTAGGATA TTGGCTAGAT
GGCAATGAAA ATTCGAGCCT AGAGCAAAAA TACGCAGAAG ATATTTCAGG AGTGCCATTC
TTGAAGACTC ATAGGGTGAA TGAACTGCCA CAACTTGCAT TAACGCGAGC GCGTAAGGCC
GACGTTGACG TAACGCTATC TATGATTTCA CTGGATTTTG AATGTGCCAT GTCAGGGGAG
CTGTATTCCG TTGGTCTTTA TGGTGACAAA AATGGTGATG ACAACGGGGC ACCTTACCAA
AAAGTGATTA TGATAGGTGA GGCCCAAGCG GATGCTAATC CATGGATAGA GTGGGTCAAT
GATGAGCGTG CACTTATTTT GAGGCTCATT ACTTGGTTTG CTGAGTACGA TCCCGATGTG
ATCATCGGCT GGGCCGTGGT GACCTTCGAT TTAGCGCTGT TATATCGGCG CTGCTTAGCG
CTTGGCATTA CCCCCGCCTT TGGTCGTCAT GGTCAAGCTT TAAGTTGGAA GGTTGCCGAT
AAATTTAGGC CCGAGACCTT GTCGCTACCA GGAAGAGTGG TGCTGGATGG CATAGATTGG
CTAAAAGCGG CTTTCTATCA GTTTGAACGT TATTCTCTAG AGTTTGTCTC CCAAGCGCTA
CTTAAAGAAG GTAAAGCGAT AGATCATGTG GAGAACCGAG CAGGGGAGAT AACCGATTTA
TTTCAAAACA ATAAACAGGC ATTGGCCCAA TACAATATTA CCGATTGCCG CTTAGTGTGG
GATATTTTCG CCAAAACAGA GCTGTTAGCG TTTGCACTAG AGCGTGCTAA GTTAACAGGG
CTTGAATTTG GCCGAGTCGG CGCCTCCATT GCCGCCTTTA ATCATCTTTA TTTACCTCAT
CTTCATCGTC ACGGCTTTGT GGCGCCAAGC ATTGCATCGA GTCAAGGTAT TGAAAGCCCC
GGCGGCTATG TGATGGATTC AGTACCAGGA TTTTATAAAG ATGTATTAGT ACTGGATTTT
AAAAGTCTTT ACCCTTCGAT TATTCGCACC TTTTTGATTG ACCCTAAGGG GCTTGTTACT
GGGATGCAGG AACGCCCAGA GCAAACCGTC CCCGGTTTTT TAGGGGCAAG CTTTAGCCGA
GAGTCACCTA TACTGCCGAC ATTAATTGCG TCCTTAGCGG CGCAGCGAGA GTTAGCAAAA
CTTGATAAGA ATAACCCGTT ATCCCATGCC ATTAAAATCA TCATGAATTC ACTCTATGGG
GTATTAGGAT CGAAGGGCTG TGTATTTCAC GACGCAAAAC TTGCAAGCTC CATTACCATG
CGCGGCCATG AAATAATGAA GCAAACACGG CGCTGGATAG AAGACTTGGG TTATCAAGTC
ATCTATGGTG ACACAGATTC AACCTTTGTC TGGCTAGGTG AAAACCATGA CATTAATAAC
ATTAACGAAT TTGGACTAAA TATTGCCAGG CAAATCACCC AACAATGGCA ACAAAAGTGC
GCTGAGGAAT TTAACATTGA AAGCTTCTTA GAGCTTGAGT TTGAAACCCA TTACAGCCAA
TTTGTGATGC CAACCTTAAG AGGATCAGAG GAGGGCAGTA AAAAGCGTTA CGTTGGTGCT
AAAGTGAATG AGCAAGGTGA AATGAGCTTA GTATTTAAAG GTATGGAACA AGTAAGAAGT
GACTGGAGCC CAATTGCCCG TCGTATTCAA TACCTTCTTT ATGAAAAATT ATTTACAGGC
GAAGACCCGG TCAATTTTAT TGAACAAGAG CTCGATGCTT TAAAACAAGG GCTGCGAAAT
TCTGAGTTAG TATTTAGGAA ACGCCTTAAA CGTAACATCG AAGATTACAC CGCTAAATCG
TCTCCTCATG TTAAAGCGGC AGCATTACGA TGTGCGGCGA CGGGTGATGA GTCATTTGGC
CGTAAAGGAG CCAATGTCGA ATACGTGATG ACTAAACAAG GTGCACGCGT CATACAAAGT
GCAAAGCTTG ATTATGATTA TGACTATTAT ATAGAAAAAC AAATTCAACC CATCGCAGAG
CCCATCTTAG GTTTATTAAA CCGCAGTTTT ATTGAATTCA CATCCAATCA ACTACCGTTA
CTTTAG
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| Protein sequence | MSSQALSSVK GRILTRHTLY REGRTVLQYF IKTQQGPALI ELDNAEVICF CRQTDLQTLE
QLLAGQLYGQ YRLANIKLKS FHHEPLACIY LNTVKQLRLV IRIAQDRGIP LFESDIKTEQ
RFLIERFIAL DAEFLGYWLD GNENSSLEQK YAEDISGVPF LKTHRVNELP QLALTRARKA
DVDVTLSMIS LDFECAMSGE LYSVGLYGDK NGDDNGAPYQ KVIMIGEAQA DANPWIEWVN
DERALILRLI TWFAEYDPDV IIGWAVVTFD LALLYRRCLA LGITPAFGRH GQALSWKVAD
KFRPETLSLP GRVVLDGIDW LKAAFYQFER YSLEFVSQAL LKEGKAIDHV ENRAGEITDL
FQNNKQALAQ YNITDCRLVW DIFAKTELLA FALERAKLTG LEFGRVGASI AAFNHLYLPH
LHRHGFVAPS IASSQGIESP GGYVMDSVPG FYKDVLVLDF KSLYPSIIRT FLIDPKGLVT
GMQERPEQTV PGFLGASFSR ESPILPTLIA SLAAQRELAK LDKNNPLSHA IKIIMNSLYG
VLGSKGCVFH DAKLASSITM RGHEIMKQTR RWIEDLGYQV IYGDTDSTFV WLGENHDINN
INEFGLNIAR QITQQWQQKC AEEFNIESFL ELEFETHYSQ FVMPTLRGSE EGSKKRYVGA
KVNEQGEMSL VFKGMEQVRS DWSPIARRIQ YLLYEKLFTG EDPVNFIEQE LDALKQGLRN
SELVFRKRLK RNIEDYTAKS SPHVKAAALR CAATGDESFG RKGANVEYVM TKQGARVIQS
AKLDYDYDYY IEKQIQPIAE PILGLLNRSF IEFTSNQLPL L
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