| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2427 |
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| Symbol | |
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| ID | 4018925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2887182 |
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| End bp | 2890082 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637956454 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_563430 |
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| Protein GI | 91793779 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000018893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA ATTTACTCGC TAAATCAGTG CGCTTTGCAT TGATCAGTGG TGCAACTGCT
GCTGCTTTTA CTGCTCCAAC CGTTTTTGCT GCTGATGAAG GCGCAAAAGT TGAGCGTATT
GAAGTGACAG GTTCACGCAT TAAGCAAACC GATATCGAAG GTGCAAACCC AGTTACAGTC
ATCGATCGTG ATGATATGAT TAAAATGGGT ATCACAGATG TTGGTAGCTT AATTCAACGT
TTACCGGCAA TGTCGGGTTC ACCTATCGGT ACTACGACCA ACAACGGTGG TAATGGTTCT
GTACAAGTTA ACTTACGTGG CTTGGGTTCT GTCCGTACTT TAGTACTGGT CAATGGCCGT
CGTACTGTTG ATGGTGGTGA TTTCCAGACT ATTCCATCAT CTATGATTAA GCGCGTTGAA
ATATTAAAAG ATGGCGCTTC AGCAGTCTAT GGTGCTGATG CTGTTTCTGG TGTTGTTAAC
ATTATTACAC GTAATGATTT TGAAGGCGTA GAAGTTACTG CACAGACTAA AGATTCGTTT
GAGACTGATT CAGGTAAAGA AAACACAGTG TCTTTTGTTG CTGGTAAGAA TTTTGATGGC
GGTAACGTTG TTGCAGGTTT TGATTACAGT GATCAAGAGA AAATTTTACA AAGTGACACT
CCTTGGTTCT TTATGCAAAA CACCTATTAC ATCACAGATG CTGATGCAGT AGATTGTGCT
TTCTGTGAAG GCAACTATTA CGATGATATG GGCTTCCAAG TTGGTAAGAC TGTCTCAGGC
TTCGGTTCAT CTCGTGTTCC AAATGGTAAC TTCTATTTTA ATAAAGATAG TGCTACTCGT
TCAAAAGGCT CTTACACAAA ATTAGATGGA GTAGCTGGAA CTGATCCATC ACACTTCAAA
CAATATAACG GTAGCTGGTC TGATCCTGCC AACGATTCTT ATAACTATGC GCCAGTAAAC
TTTTTACAAA CACCTTATAA GAAGTGGAAT GCGTTCATTG AAACTCAGTA TGAGATCAAT
GATTCTCTAG AATACTTCAA TGAGCTACGT GTTAACTACC GTGAATCTTC ACAAAAGTTA
GCGCCAATGC CGTTTGATAC CAATAATGAT CCTGGTTACT CAGTCGCATT AAGAAATGCT
GATGGTACTC CAGCGCTGAA CAAAGAAACT GGCCTTCAAA CTTATGCAAA TGGCGTGTCA
AAAGATAACG TGTATAACCC ATTTGGTGAA GATCTTACTC GAGTTTCACG TCGTGTTGTT
GAAGATAACC GTACATTCGA ACAAGATGTA TTACAATTCC AATTTGTTAA CGGCCTAAAA
GGTGAGATTA ATGATAATTG GACATGGGAT GCAAGCTACA ACATGGGTTA CAGAACCCGT
ACAGATACCG ATAAAGGTCA ATGGTTCGGT CCTAACGTAG CGAATGCTTT AGGTGCTTCA
TTTAAAGATT CTCAGGGTAA TATGGTATGT GGTACTCCTG ATAAGCCAAT TGCAGGTTGT
GTTCCTTTAA ACTTGTTTGG CGGACCAGGT ACTATTACTC AAGATATGCT TGATTATATC
GGTGCGGATT TAGTCGATAC AAGTCGTAGC CGTCAAGATG TGTTCACGGC TGCCGTCGCT
GGTGATCTTT TTGAACTGGA TGCCGGTACT GTAGGTGCCG CTATTGGTTA TGAATATCGT
CGTGAAGAAT TCGTAAACAC GCCTGATTCA GCTAAACAAA AAGATGAAGC TACCGGTAAT
ACTGGTGCCG GAGTCTCTGG TGCATACCAG GTTAACTCTT TGTTCACTGA AATAAACATG
CCATTACTTT CTGGTGTGAC AGGTGCTGAG TTACTAGAGC TTAAAATGGG TGCTCGCTAC
GATAACTTTA GTTCATTCGG TGGCAATACT ACGTTCCAGT CTGGAATTAA GTGGATGCCG
ATCGATGGTT TATTAGTCCG TGGTACTTAC GGTGAAGTGT TCAGAGCTCC GTCAATTAAT
GAATTGTACG CCGGTATTGC TGATAGTTTC CCAACGACTC AAGATCCATG TAATACAGGT
AAAATTGGTG GCTTAAGTGC CGCTGGTCAG GCAATTTGTG CCGCTCAAGG TGTTCCTACT
GGCGGCGCTA TTCAAGCTGA CTCTCAGTTA AGAGCAAGAG TTGGTGGCGA ACAAGACCTT
AAGCCTGAAA CAGGTGATAC GGTTACTCTA GGTGTATCTT ATTCACCTGA GTTTGTTGAC
GGTTTGAATG TCACAGTGGA TTACTGGAAA ATTCAGCTTG AAGACGTAAT CGATTCTTTA
TCAGCAGCCA ATGCTCTAGA TTTATGTTAC ACAGCTTTGA ATGCAACTGA GTGTAATAAC
ATTACGCGTA AGTCAAATGG TTCTATAGAA GCGGTTTATA CTATTAATCG TAACTTAGCT
GAGCGTACAG CAGCTGGTAT TGACACTGAA GTTAGCTATA AAATGTCAAC TGAAATTGGT
GATTTCAGTG CCTTCCTAGG CTGGACACAC CTATTAGAAA GAGAAGACAT TGATTATCTA
GGTGCTGAAC CACGTGATAT GGTAGGCACT TATGATTTCA GCTTACAAGA AACATTCGCG
GAAGATAAAA TCAACTTCAG CTTAGATTAT TACTGGAATG ATCTTTCTGT AAGCTATTCT
GCTGAATACA TCGGTGATAC TACTGCAGCG ACAACGTTCT GGGAAGCTCA AGGTTATAAG
CAAAAAATCG ATGCTCAGCT TTATCATGAT CTTGCTTTTG CATATAGCTT CGATACAGGA
ACTCGCGTTT CGTTAGGTCT AACTAACATT ACAAACGAAG AGCCTGTTTA TATCGATAAT
GGTGCCAATG CGAGTACAGA TCCAACAACA TATCGCTTGT TCGGCAGTTC TTACGTATTG
CGTTTAACTC AAAAGTTCTA A
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| Protein sequence | MNKNLLAKSV RFALISGATA AAFTAPTVFA ADEGAKVERI EVTGSRIKQT DIEGANPVTV
IDRDDMIKMG ITDVGSLIQR LPAMSGSPIG TTTNNGGNGS VQVNLRGLGS VRTLVLVNGR
RTVDGGDFQT IPSSMIKRVE ILKDGASAVY GADAVSGVVN IITRNDFEGV EVTAQTKDSF
ETDSGKENTV SFVAGKNFDG GNVVAGFDYS DQEKILQSDT PWFFMQNTYY ITDADAVDCA
FCEGNYYDDM GFQVGKTVSG FGSSRVPNGN FYFNKDSATR SKGSYTKLDG VAGTDPSHFK
QYNGSWSDPA NDSYNYAPVN FLQTPYKKWN AFIETQYEIN DSLEYFNELR VNYRESSQKL
APMPFDTNND PGYSVALRNA DGTPALNKET GLQTYANGVS KDNVYNPFGE DLTRVSRRVV
EDNRTFEQDV LQFQFVNGLK GEINDNWTWD ASYNMGYRTR TDTDKGQWFG PNVANALGAS
FKDSQGNMVC GTPDKPIAGC VPLNLFGGPG TITQDMLDYI GADLVDTSRS RQDVFTAAVA
GDLFELDAGT VGAAIGYEYR REEFVNTPDS AKQKDEATGN TGAGVSGAYQ VNSLFTEINM
PLLSGVTGAE LLELKMGARY DNFSSFGGNT TFQSGIKWMP IDGLLVRGTY GEVFRAPSIN
ELYAGIADSF PTTQDPCNTG KIGGLSAAGQ AICAAQGVPT GGAIQADSQL RARVGGEQDL
KPETGDTVTL GVSYSPEFVD GLNVTVDYWK IQLEDVIDSL SAANALDLCY TALNATECNN
ITRKSNGSIE AVYTINRNLA ERTAAGIDTE VSYKMSTEIG DFSAFLGWTH LLEREDIDYL
GAEPRDMVGT YDFSLQETFA EDKINFSLDY YWNDLSVSYS AEYIGDTTAA TTFWEAQGYK
QKIDAQLYHD LAFAYSFDTG TRVSLGLTNI TNEEPVYIDN GANASTDPTT YRLFGSSYVL
RLTQKF
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