| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2414 |
|---|
| Symbol | |
|---|
| ID | 4018912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2874968 |
|---|
| End bp | 2877286 |
|---|
| Gene Length | 2319 bp |
|---|
| Protein Length | 772 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637956441 |
|---|
| Product | ferrous iron transport protein B |
|---|
| Protein accession | YP_563417 |
|---|
| Protein GI | 91793766 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.331306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGC AATTTCATTG CGTTACTGTT GGTAACCCTA ATGCAGGAAA ATCGACACTG
TTTAATGCCC TTACAGGCTC GAACCAACAA GTAGGTAATT GGGCTGGCGT CACTGTTGAG
AAGAAAACAG GGACCTTTAC ATTAGACGAT ACCCAAGTTT TTTTGACTGA CTTGCCTGGC
ATTTACGACT TGCTCCCTGC GGGTAACAAT TGCGACTGTT CTTTAGATGA GCAGATTGCT
CAGCAGTTTC TTGCCAATGA TCGTATCGAT GGCATTATAA ATCTTGTCGA TGCGACCAAT
ATTGAACGCC ACCTTTATCT TACCATTCAG CTGCGAGAGC TTGGCCTGCC TATGGTGCTG
GTGCTGAATA AAATTGATGC CGCGAATAAA CTCGGCATTG AAATTGATAT CGCAGCGATG
GAGACCGTTC TTGGCTGCCC TGTGATAGCT GTGTGTTCTC GTGAGCAAGA AGATGTCCGC
TTAGTACAGG CTCAAGTATC TCACTTATTA ACAGCGACCG TAGCTGTAAA ACCACTCATG
CTTAATTATG CATCGAGCAT AGAAGCTGCC ATCAGCCAAC TTCAGGTTCA TGATAATAGC
TTAAATCGTG GCCGCGCTTT AGCCCTACTT GCCAGTGGTC AGGATAGCTG TCGTCCGGTG
AGCATTGATG AGAAAAATGG TGATTCGAAT ACACTCAATC GTAGCCAAGA TCAGTGTGGT
ACTAAGACGA GTGCTCATGA TAGTGACTTG GAAATCTCGC TGGCCACCAC ACGTTTTGAT
TTTGTTGAGA CGGTTTTTGA GCAAGCGGTA AAACGTGGCA CAGTACTTAG GTTGAGCGAT
AAACTCGATA ACCTTGCTCT GCATCCCATT TTGGGCATTC CAGTATTCCT ATTTATCATG
TATTTGATGT TTATGTTCAG CATCAATGTG GGCAGTGCCT TTATTGATTT CTTCGATATC
AGCGCGGGCG CTATTTTTGT CGATCACTTC GGTGCACTGC TTAGCAGCAT GGGCTCTCCC
GATTGGCTAG TGACGATTCT AGCTGGCGGC CTCGGGCAAG GAGTACAAAC TGTTGCGACC
TTTATTCCTG TCATTGCGGC CTTATTCTTA GCTTTGTCTG TGTTAGAGGC TTCAGGTTAC
CTTTCAAGAG CGGCGTTTGT TGTGGATGGT TTGATGCGCC GCATCGGACT TCCTGGTAAA
GCGTTCGTTC CCATGATAGT CGGATTTGGC TGCTCCGTAC CTGCGATTAT GGCTACACGC
ACCTTAGGCA GTGAGCGTGA GCGGATTGTC ACAGGTATGA TGGCGCCTTT CATGTCTTGT
GGTGCCCGCT TACCTGTGTA CGCCTTGTTT GCTGCCGCAT TCTTTCCTGA ATCGGGTCAA
AACCTTGTAT TTTTGCTGTA TATCATAGGT ATTTTCGCCG CTATTGGTAC AGGTTTGCTG
CTGCGTAGTA CGGTATTACC TGGCACCAGC AGCGCCGTCG TAATGGAGCT ACCCAGCTAT
GAACTTCCTA AGATAAAGGC TGTATTGGCT CGCACGGCGA AGCGGACTAA GAGTTTTATT
TTAGGTGCAG GTAAGACGAT TGTGCTAGTA GTGACTTTCC TTAATTTCAT CAATGCAATA
GGTCTTGATG GCAGCTTCGG TCATGAAGAC AGCCAAGCCT CATTATTGAG TGTGGCAAGT
CAAAAGGTGA CGCCTTTATT TGCCCCCATG GGGATTGAGC AAGATAATTG GCCTGCAACC
GTTGGGATCA TCACAGGTAT TTTTGCTAAA GAAGCCGTGG TTGGTACCTT AAACAGTTTA
TACAGCCCAG TGGGCGGCCA AGATACAGAG TTGACTCCAT TGGGAGAAAG CTTTGCAGAA
GCGCTAGCGA CTATTCCTGT GAACTTATTT GGTATCGCCC CTGATGACCC TTTATCCATG
TCAGTGGGTA ACGTAGAAAG CATTGATCTT GCAGCTGAAG AGCAGGGCGT TGATAAGTCC
ACCTTTAGCG CGCTACAAGC AGGATTTAGC GGTCAGCTTG CAGCATTCTC ATATCTACTG
TTTATCTTGC TCTATACCCC TTGTGTGGCG GCTATGGGTG CATTGGTGAA TGAGTTTGGT
GTTAAGTGGG CTAGGTTTGC GGCATTATGG ACCTTTGCAC TGGCATACGG CACAGCAACA
GTGGTGTATC AAGGTGCAAC CTTTACTGAA CATCCAATGC AGTCTTCGGC GTGGATAGGC
TTCTTTATGC TGGCGTTACT GGTGTTTTAT TTCTGGCTTA AACGTCAAGG CAAAAAAGCA
CAACAGATTA TTCCGGGTAT TAGAATCGTC ACAGAGTAG
|
|---|
| Protein sequence | MTKQFHCVTV GNPNAGKSTL FNALTGSNQQ VGNWAGVTVE KKTGTFTLDD TQVFLTDLPG
IYDLLPAGNN CDCSLDEQIA QQFLANDRID GIINLVDATN IERHLYLTIQ LRELGLPMVL
VLNKIDAANK LGIEIDIAAM ETVLGCPVIA VCSREQEDVR LVQAQVSHLL TATVAVKPLM
LNYASSIEAA ISQLQVHDNS LNRGRALALL ASGQDSCRPV SIDEKNGDSN TLNRSQDQCG
TKTSAHDSDL EISLATTRFD FVETVFEQAV KRGTVLRLSD KLDNLALHPI LGIPVFLFIM
YLMFMFSINV GSAFIDFFDI SAGAIFVDHF GALLSSMGSP DWLVTILAGG LGQGVQTVAT
FIPVIAALFL ALSVLEASGY LSRAAFVVDG LMRRIGLPGK AFVPMIVGFG CSVPAIMATR
TLGSERERIV TGMMAPFMSC GARLPVYALF AAAFFPESGQ NLVFLLYIIG IFAAIGTGLL
LRSTVLPGTS SAVVMELPSY ELPKIKAVLA RTAKRTKSFI LGAGKTIVLV VTFLNFINAI
GLDGSFGHED SQASLLSVAS QKVTPLFAPM GIEQDNWPAT VGIITGIFAK EAVVGTLNSL
YSPVGGQDTE LTPLGESFAE ALATIPVNLF GIAPDDPLSM SVGNVESIDL AAEEQGVDKS
TFSALQAGFS GQLAAFSYLL FILLYTPCVA AMGALVNEFG VKWARFAALW TFALAYGTAT
VVYQGATFTE HPMQSSAWIG FFMLALLVFY FWLKRQGKKA QQIIPGIRIV TE
|
|---|
| |