Gene Sden_2381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2381 
Symbol 
ID4018879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2833696 
End bp2836461 
Gene Length2766 bp 
Protein Length921 aa 
Translation table11 
GC content48% 
IMG OID637956408 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_563384 
Protein GI91793733 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.91992e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTATC AGGTGTTAGC TCGAAAATGG CGCCCAGCCA AGTTCGAACA GATGGTGGGA 
CAGTCCCATG TATTATTGGC ATTAACTAAT GCCCTAAGTC AGCAAAGGTT GCATCATGCG
TATTTGTTTA CTGGGACCCG AGGGGTGGGA AAAACCAGTT TAGCCCGGCT GTTTGCCAAG
GGACTAAACT GCGAGACTGG CGTCACTGCG AGCCCTTGTG GAACCTGTTC CAGTTGTGTT
GAAATTGCTC AAGGTCGATT TGTCGATCTG ATTGAAGTGG ACGCCGCCTC CCGCACTAAA
GTCGATGACA CCCGAGAACT GCTGGACAAT GTGCAATACA AGCCTGCCAG AGGGCGCTTT
AAGGTCTACC TTATTGATGA AGTGCACATG TTATCTCGTA GCAGTTTTAA CGCCCTGCTT
AAAACCTTAG AAGAGCCACC AGAGCACGTT AAATTTTTGC TGGCGACAAC GGATCCACAG
AAATTGCCTG TGACTGTGTT GTCTCGGTGT TTGCAATTTA ATCTTAAAAG CTTATCTCAG
GATGAAATCT CTCAGCAGCT GGAGTTTATT CTTGGCCAAG AGCAACTTCC TTTCGAATCC
CAAGCGCTGA CATTATTGGC AAAAGCGGCC AATGGCAGTA TGCGTGATGC CTTGAGTTTA
ACCGATCAAG CCATCGCATT TGGAAGCGGT CAAGTGATGC TTACTCAAGT GCAGACCATG
CTCGGCAGCA TAGATGAGCG TCAAGTGATA GGTTTACTTA AGAGCTTATG TGATGCCGAT
ATCGCCCATT TGATGCAAAC CACGGCGCAA GTCTTGTCTT TTGGCGCCGA TGCCGATGAA
GTGCTGCGCA GCCTGCTTGA ATTATTGCAC CAGATAACCT TAAGCCAATT CGCCCCAGCC
GCGGCGCAGC ATTCACTCTA TAGTGAACAA ATTTTAGCAT TCGCAAAGCA GCTTAAGCCT
GAGCAAGTGC AGTTGTATTA CCAAATTTTA TTGACTGGCA GAAAGGAGCT GGCGTTTGCG
CCTGATCCAA AATCCGGTCT TGAAATGGCG CTGCTTAGGG CGGTTGCCTT CGTGCCAGAA
AAAACCGTTA ACCGTTGGGT TGTGGACGAT ACAGCCACAC TCGAACTCCC CAATGGCACA
AGTAAGGCGG CAGCCAAAAC AAAACCTGAG CCAGACGTGA AGTTGAGCGC TGAAACGACT
GAGGTGACTG AAGCGACTGA AACCCTTGCT GTTTTAGGCA CGCCTGTAGC ACAGACAATA
ACGGCAGAGG TGGCATCCCT TGAAGTAAAG GATACACCCA GTGACACTGA GCAAGTCATC
GAAGATGATG AAGGTGCACC ATTAAAGGCA CTAACAGCCG AACAAGACGT GCTACTCAGC
CAAGCTGCTA GCATGGGATT TGAGCCGCAA AACAGCAATG ATGACAGTCC ATCATCAGAT
GTTGTCGTTA ATGATACTTC ATCAGCTCAA GCTAACGATG ATGCCAGTGT GACTGATGAG
TACGCAGATT ACATGCACTA TGGCTTTGAT GAGCAAGTGT CAGAGGCGCA CCCTGACGCC
TATCTACAAG AGCCGACCTT AGATAGCCAT TCAGCAGAAG AAAGCCTGTT AGTCGCAGAG
GGTGTATCTG TCGATGGAGC GGCATTATCT AGCTCAGCCG TTTTAAATCC AGAGGTAAGC
CAAGAGGCGT TGACACTTGC AGTGTCAGAT GAAGCATTAG CCCCTGTGGT TGATGACATT
TTAGATGCCG TGCTTGCCAG TCGTGATGCG TTAATCGCAG ATGTGAGTGC GATTAATCTT
GCCAATAATG CTGAGCCAAA TGCTGGCAGC ATTAAGGTAG GTGTTGCAAA AAAGCCACTG
GGGGCTCCTC AAGCTAGCAC CCAGGTAGAA AGTGTAAGGC CGCAGGCTGA AACTGAAGCT
CAGAATCATG CACCACAAGC ATTAGTGACT CAGGAAGCGC CTCTGTTAGA CAAAGTGTCC
ACAGATGCTG ATAGGCCGCC ATGGGTGGCA GCAAGTGATG GGTCATCACA GTTTGACCCA
CTAAAACTTG CCCAAGATAC GCCATTGTCC CATGCTCAAG ATAATAGGGT GAGCAGTGTA
GGGATGGAAG ACAAGACCAC ATTGGACTCA ATACTTCCAG TCATTGAAGC ACTGCCGGCT
ATCGAAGCAG AAGCGCAAGG GACAGGGTAT GCTGAGAAAA TGCTTGATAC AGCCATGCCT
GCTAAATTAA TGTCCGATGT AGCAGATGAT GATTCTGGCA TTGACGCTCA GCTGATTTCA
GAGCATCAGA TAAGCGGTCA TGAGATGGAT TTGCATTGGT ATAAAATGAT GGCAGAAGTT
AAAATTGGCG GGCGAATAAG ACAGCTTGCC GTTAACTCTG TCTGCCAAGG CTTAGCGTCA
CCTTTCCCTT TATTGCTAAA GCCAGATCAA AAACATTTAG GCGCGGATGT GGCGGTAAAA
CAGCTGGAAG CGGCGCTGAG TGAATACTTG CAACAAGATG TCAGTATTGC CGTCAATGTG
GGATATGATG AACACAGAGA AACGCCGCTG GAATTGCGAA AGCGATTTCA TCAAGAGTTA
TTGCAACAAG CAAAACAGCG TTTAATCGGC AGTAACAAGG TACAATGGCT ACTTAGCCAA
TTGGACGCCC AGCTTCAAGA AGACAGCTTA GTCTACCCAG CTGAGCAGTT ACAGCAAGTT
GGACAGCGGA TCACATTTCA GCAGCAAGAC GCAGACAGTG TGCAAAAATT TGCCTCAATT
GCCTGA
 
Protein sequence
MSYQVLARKW RPAKFEQMVG QSHVLLALTN ALSQQRLHHA YLFTGTRGVG KTSLARLFAK 
GLNCETGVTA SPCGTCSSCV EIAQGRFVDL IEVDAASRTK VDDTRELLDN VQYKPARGRF
KVYLIDEVHM LSRSSFNALL KTLEEPPEHV KFLLATTDPQ KLPVTVLSRC LQFNLKSLSQ
DEISQQLEFI LGQEQLPFES QALTLLAKAA NGSMRDALSL TDQAIAFGSG QVMLTQVQTM
LGSIDERQVI GLLKSLCDAD IAHLMQTTAQ VLSFGADADE VLRSLLELLH QITLSQFAPA
AAQHSLYSEQ ILAFAKQLKP EQVQLYYQIL LTGRKELAFA PDPKSGLEMA LLRAVAFVPE
KTVNRWVVDD TATLELPNGT SKAAAKTKPE PDVKLSAETT EVTEATETLA VLGTPVAQTI
TAEVASLEVK DTPSDTEQVI EDDEGAPLKA LTAEQDVLLS QAASMGFEPQ NSNDDSPSSD
VVVNDTSSAQ ANDDASVTDE YADYMHYGFD EQVSEAHPDA YLQEPTLDSH SAEESLLVAE
GVSVDGAALS SSAVLNPEVS QEALTLAVSD EALAPVVDDI LDAVLASRDA LIADVSAINL
ANNAEPNAGS IKVGVAKKPL GAPQASTQVE SVRPQAETEA QNHAPQALVT QEAPLLDKVS
TDADRPPWVA ASDGSSQFDP LKLAQDTPLS HAQDNRVSSV GMEDKTTLDS ILPVIEALPA
IEAEAQGTGY AEKMLDTAMP AKLMSDVADD DSGIDAQLIS EHQISGHEMD LHWYKMMAEV
KIGGRIRQLA VNSVCQGLAS PFPLLLKPDQ KHLGADVAVK QLEAALSEYL QQDVSIAVNV
GYDEHRETPL ELRKRFHQEL LQQAKQRLIG SNKVQWLLSQ LDAQLQEDSL VYPAEQLQQV
GQRITFQQQD ADSVQKFASI A