| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2321 |
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| Symbol | |
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| ID | 4018813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2745197 |
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| End bp | 2747431 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956343 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_563324 |
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| Protein GI | 91793673 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.130994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCTC CAACTTGTTT ATCCTTACCC GTAAAATCTA CCCTAACGCT TGCCATCATG
GCCGCATTGA CTGTGCCTGC CGTTGCCACT ACCGCAGACA TTGAACGCCG TGCCCTCGAT
GGTGACAAGA TGGAAGTCAT AGTGGTCAAT GCCGATTTCA GTGGCATTAA TCTCGACAAG
ATGCCGTCTA GTGTCACAGT CATCGACGCC CAGCAGCTTG AAGATGAAGG GGCGCAGCAT
TTTGAAGATG TGCTAAATAG CATCGCCAAT TTTAATTGGT CTGGCGGCAG CTCTCGTCCT
AAATATTTTC AAATCCGCGG CGTCGGTGAG CAAGAAGACT ATAAAGGCGC GCCTAATTCA
TCCGTCGGTT TTATTATGGA TGACATAGAT TTATCCGGCC TTGGCAGTAT TGCTAGCATG
TATGACATGC AGCAAGTCGA AGTGCTTCGT GGCCCTCAAG GCACACAATA CGGTGCTAAT
GCACTGGCGG GCCTTATTTA CCTTAAAAGT AATGATCCGA GTCAAGAGTC AGAGCAGGGC
ATGGAGGTGA GCGTCGGTGA TGATAACCTC ACCACTTTTG CAGGTTTTAG CTCAGGGCCA
GTTTCAGACT CAGGTAAACT CTTGTACCGC ATCTCCGTTG AGAAACACAA TCAAGACGGC
TTTAAAGATA ATCTTTATCT TGGCCGCGCT GACACCAATG AGCGTGATGA ATTCAATACT
CGCGCCAAAC TGCGCTGGTA CGCCACCGAT ACGCTGCAAT TAGATTTAAC CTTATTGCAT
GCTAATTTTG ATAATGGCTA TGATGCATGG ACATTGGATA ACAATGGCCG TCAGACTTTA
ACTGACTTAC CGGGCACAGA TAATCAGCAA ACCACAGGGG CAGGCTTTAA GGCCATCTAC
AGCGGCGCCG AACAGTTTGA ACTTACCTCG CTAACGTCCT TCGCCAGTAC TGACCATCAG
CATGCCTATG ACGGTGACTG GGCGAATGAC AGCTATTGGT CCTCAAAGCA ATGTGCTGTT
TGGGATGAGG ATTGGACAAT GTCCCTTGGC AGTTTACCCT GTGTTTATAA TGCCACTTGG
GATAAAAAAG CGGAGCGCGA CACGTTAACT CAAGAATTTC GATTGGCTTC CAAAGAGAGC
GGAAAAATAT TCTTTGATTC AACTAGCTGG CTAATTGGTG TGTATGGCAG GCAACTTAAG
GAAGATAACT CACTTATCGA TTATGCTCGC TATAGCAATG GTCAAGTAAA TCCAAGTGTT
AAAGAAAGAA CTAAATATTT AGACTCTCAA TACGATGCTT CAAACTTCGC TATTTTTGGC
CAACTAGATA GTGAATTAGA ACATGGCTAT TTATTGTCTG CAGGATTAAG AATTGAGCGT
CGAAATAGTG ATTATAGCGA TACAAATGGC GATGACTTTA ACCCTTCAGA AACCATGTGG
GGGGGACACC TTTCATTATC AAAATCAATA AATAGCCAGC ATACTGCCTA TACTCGACTA
GCCAAAGGTT ATAAGTCAGG TGGCTTTAAT ATGTCATTAA CTGAGGATTT TGCAGATAAA
AGGTCCTATG ATGCAGAGAC TTTAAATAAC CTTGAAATAG GTTTGAAATC ATCGTGGTTA
GATGGGGACT TAGTCACAAA TACTGCACTA TTTTATATGA CTAGAGATGA TCAACAAGTC
TCAACTTCAC TGCAAAATCC AAATGATAAA TCTGATTTTA TTATGTTCAC TGATAATGCT
GGCAAGTCTA ATAACTACGG TATGGAATTT GATTTTGATT GGTATGCCAC AAATAAAGTG
AAGTTCTATG GAAGCTTGGG TTGGTTGAAT GCAAAATACG ATGAATATCA ATATGCTGTA
AGCGAAACAG AAAAAGCCAA TTTAAATGGA CGTGATTTAG CCCATTCACC TAAGCTGACC
TACAGTGCAG GCATGACCTA TCTGGCCGAT ACGGGCTGGT TTGTTAACCT AAATGCCAGC
GGTAAGAGTG AGTTTTATTA TTCAGACAGC AATGAATCAA CCTCAGAGCC TTATGTCATT
ATGAATGCCA GAGTGGGCTA TGAGACCCAG ACATGGTCGG CGTATCTGTG GGGGCGTAAC
TTGTTCGATG AAGAATATGG TGTTAGGGGC TTCTACTTTG GCAACGAGCC AGATAGTGAT
TGGGCCGATA AGCAGTATCT TCGCTTCGGC GACCCGCGCC AGCTGGGGTT GACTTTATCT
GTTAAATTTA TGTAA
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| Protein sequence | MSAPTCLSLP VKSTLTLAIM AALTVPAVAT TADIERRALD GDKMEVIVVN ADFSGINLDK
MPSSVTVIDA QQLEDEGAQH FEDVLNSIAN FNWSGGSSRP KYFQIRGVGE QEDYKGAPNS
SVGFIMDDID LSGLGSIASM YDMQQVEVLR GPQGTQYGAN ALAGLIYLKS NDPSQESEQG
MEVSVGDDNL TTFAGFSSGP VSDSGKLLYR ISVEKHNQDG FKDNLYLGRA DTNERDEFNT
RAKLRWYATD TLQLDLTLLH ANFDNGYDAW TLDNNGRQTL TDLPGTDNQQ TTGAGFKAIY
SGAEQFELTS LTSFASTDHQ HAYDGDWAND SYWSSKQCAV WDEDWTMSLG SLPCVYNATW
DKKAERDTLT QEFRLASKES GKIFFDSTSW LIGVYGRQLK EDNSLIDYAR YSNGQVNPSV
KERTKYLDSQ YDASNFAIFG QLDSELEHGY LLSAGLRIER RNSDYSDTNG DDFNPSETMW
GGHLSLSKSI NSQHTAYTRL AKGYKSGGFN MSLTEDFADK RSYDAETLNN LEIGLKSSWL
DGDLVTNTAL FYMTRDDQQV STSLQNPNDK SDFIMFTDNA GKSNNYGMEF DFDWYATNKV
KFYGSLGWLN AKYDEYQYAV SETEKANLNG RDLAHSPKLT YSAGMTYLAD TGWFVNLNAS
GKSEFYYSDS NESTSEPYVI MNARVGYETQ TWSAYLWGRN LFDEEYGVRG FYFGNEPDSD
WADKQYLRFG DPRQLGLTLS VKFM
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