Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2306 |
Symbol | rbgA |
ID | 4018798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2732566 |
End bp | 2733507 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956328 |
Product | ribosomal biogenesis GTPase |
Protein accession | YP_563309 |
Protein GI | 91793658 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.575224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAATTC AGTGGTACCC AGGGCACATG CATAAGGCTC GCAAAGAAAT CGAAGAGGCC ATGCCTCAAG TCGATTTAGT GATCGAGGTG CTTGATGCAC GTATCCCATA CAGCAGTGAA AATCCTATGA TTGCACAGCT CAGGGGCGAT AAACCTTGTA TCAAGTTGCT TAATAAAGCC GATTTAGCGG ATCCCGAAAT CACAGCCCAA TGGATTGAAT ACCTTGAGCA AGAGCAAGGG GTTAAAGCCT CTGCCATCAC CACGCTGCAA CCAGGCATGG TTAAGCGTAT TCCCGATATT TGCCGTAAAC TCGTGCCACA CCGAGATATC ACAGAAAAAG ACATTCGCAC CATGATAATG GGCATTCCTA ACGTCGGTAA ATCTACTATT ATCAATACAT TAGCTGGACG TGTTATCGCT AAAACTGGTA ACGAGCCGGC GGTCACTAAA AACCAGCAAC GCATTAATTT GCGTAATGGC ATAGTCCTTT CCGATACCCC AGGTATTTTG TGGCCCAAAG TGGATAACGA AGCTAGCAGT TACCGTTTAG CCGTCACTGG CGCCATCAAA GACACCGCCA TGGAATATGA AGACGTGGCA CTGTTCGCTG CGGCTTACTT CCTAAAAGCC TATCCAGACG CTATTTGTGA GCGTTATAAA CTTAAAGAGT TACCTAAGGA TGATATGGCT CTGCTTGAAG CCATAGGTCG TTCACGAGGT GCACTCAGAC CCGGTGGGCG TATTGATTAC CACAAGGTGT CTGAATTACT GCTGCATGAG TATCGCTCAG GTCAAATTGG GTTATTGACC TTGGAAACCC CTGCTATGGT GGAAATTGAA AAGGTTGAAG TGGCCCGAGT ATTAGCCGAA AAAGAAGCCA TCAAGCAACA AAAAATTGAG TTGGAGCGAT TAAAACGCTC TGGAAAGCGT CATAACGATT AA
|
Protein sequence | MAIQWYPGHM HKARKEIEEA MPQVDLVIEV LDARIPYSSE NPMIAQLRGD KPCIKLLNKA DLADPEITAQ WIEYLEQEQG VKASAITTLQ PGMVKRIPDI CRKLVPHRDI TEKDIRTMIM GIPNVGKSTI INTLAGRVIA KTGNEPAVTK NQQRINLRNG IVLSDTPGIL WPKVDNEASS YRLAVTGAIK DTAMEYEDVA LFAAAYFLKA YPDAICERYK LKELPKDDMA LLEAIGRSRG ALRPGGRIDY HKVSELLLHE YRSGQIGLLT LETPAMVEIE KVEVARVLAE KEAIKQQKIE LERLKRSGKR HND
|
| |