Gene Sden_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2306 
SymbolrbgA 
ID4018798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2732566 
End bp2733507 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content46% 
IMG OID637956328 
Productribosomal biogenesis GTPase 
Protein accessionYP_563309 
Protein GI91793658 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID[TIGR03596] ribosome biogenesis GTP-binding protein YlqF 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.575224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTC AGTGGTACCC AGGGCACATG CATAAGGCTC GCAAAGAAAT CGAAGAGGCC 
ATGCCTCAAG TCGATTTAGT GATCGAGGTG CTTGATGCAC GTATCCCATA CAGCAGTGAA
AATCCTATGA TTGCACAGCT CAGGGGCGAT AAACCTTGTA TCAAGTTGCT TAATAAAGCC
GATTTAGCGG ATCCCGAAAT CACAGCCCAA TGGATTGAAT ACCTTGAGCA AGAGCAAGGG
GTTAAAGCCT CTGCCATCAC CACGCTGCAA CCAGGCATGG TTAAGCGTAT TCCCGATATT
TGCCGTAAAC TCGTGCCACA CCGAGATATC ACAGAAAAAG ACATTCGCAC CATGATAATG
GGCATTCCTA ACGTCGGTAA ATCTACTATT ATCAATACAT TAGCTGGACG TGTTATCGCT
AAAACTGGTA ACGAGCCGGC GGTCACTAAA AACCAGCAAC GCATTAATTT GCGTAATGGC
ATAGTCCTTT CCGATACCCC AGGTATTTTG TGGCCCAAAG TGGATAACGA AGCTAGCAGT
TACCGTTTAG CCGTCACTGG CGCCATCAAA GACACCGCCA TGGAATATGA AGACGTGGCA
CTGTTCGCTG CGGCTTACTT CCTAAAAGCC TATCCAGACG CTATTTGTGA GCGTTATAAA
CTTAAAGAGT TACCTAAGGA TGATATGGCT CTGCTTGAAG CCATAGGTCG TTCACGAGGT
GCACTCAGAC CCGGTGGGCG TATTGATTAC CACAAGGTGT CTGAATTACT GCTGCATGAG
TATCGCTCAG GTCAAATTGG GTTATTGACC TTGGAAACCC CTGCTATGGT GGAAATTGAA
AAGGTTGAAG TGGCCCGAGT ATTAGCCGAA AAAGAAGCCA TCAAGCAACA AAAAATTGAG
TTGGAGCGAT TAAAACGCTC TGGAAAGCGT CATAACGATT AA
 
Protein sequence
MAIQWYPGHM HKARKEIEEA MPQVDLVIEV LDARIPYSSE NPMIAQLRGD KPCIKLLNKA 
DLADPEITAQ WIEYLEQEQG VKASAITTLQ PGMVKRIPDI CRKLVPHRDI TEKDIRTMIM
GIPNVGKSTI INTLAGRVIA KTGNEPAVTK NQQRINLRNG IVLSDTPGIL WPKVDNEASS
YRLAVTGAIK DTAMEYEDVA LFAAAYFLKA YPDAICERYK LKELPKDDMA LLEAIGRSRG
ALRPGGRIDY HKVSELLLHE YRSGQIGLLT LETPAMVEIE KVEVARVLAE KEAIKQQKIE
LERLKRSGKR HND