Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2282 |
Symbol | |
ID | 4018774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2707294 |
End bp | 2708025 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956304 |
Product | hypothetical protein |
Protein accession | YP_563285 |
Protein GI | 91793634 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.102117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCCT GTTTTCTTTT GAGATGTATG ATGGAACTCA CTGAATTTGA AGCAAGAGTC ATAGGCTGCC TGTTAGAAAA GGAAGTCACG ACCCCAGATC AATACCCGCT TTCACTTAAT GCCCTCACGC TTGCCTGTAA CCAAAAAAGC AGCCGTGAAC CGGTAATGAG TCTCACAGAA AGCCAAGTTC AAGCAAGCCT TGATGAATTA GCCAAGAAGC GCTTAGTCAG TGAACAATCT GGCTTTGGTA GTAGAGTCGT TAAATACAAG CACAGATTCT GCAATACCGA GTTCAGTGAA CTGCAATTCT CCAGTGCAGA GCTTTCATTA ATCTGCTTGT TGCTACTCAG AGGCCCACAA ACGCCTGGGG AGCTCAAGAG TCGCAGTCAA AGACTGCATG AATTTTCCCA TGTCAGTGAA GTTGAACATT GCCTGTATAG CTTGTCTCAG TCAGATAAGC CTCATGTTGC TATGTTGGCA AGGGAGCCCA ATAAACGTGA ACATCGTTAC ATCGAACTCT TCAGCCATGG CGTAAGTGAG GCTTTGACCT TGGCCGCTGA CACACAGCAT CAGCGCCCTC CACAAACACC TCATCTCAGC AGCAGAACAA ATGTGGACAA TTCTTACGAA TCTGATGAGA GGTTCACCCA GCTTGAAGGC AGAATTAATC AGCTCGAACA ACAAGTGGCA TCTTTAGAGG CCAAGCTACT GGGTTTATTG AGCAATACAT AA
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Protein sequence | MEACFLLRCM MELTEFEARV IGCLLEKEVT TPDQYPLSLN ALTLACNQKS SREPVMSLTE SQVQASLDEL AKKRLVSEQS GFGSRVVKYK HRFCNTEFSE LQFSSAELSL ICLLLLRGPQ TPGELKSRSQ RLHEFSHVSE VEHCLYSLSQ SDKPHVAMLA REPNKREHRY IELFSHGVSE ALTLAADTQH QRPPQTPHLS SRTNVDNSYE SDERFTQLEG RINQLEQQVA SLEAKLLGLL SNT
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