| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2278 |
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| Symbol | |
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| ID | 4018770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2701635 |
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| End bp | 2702567 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956300 |
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| Product | agmatinase |
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| Protein accession | YP_563281 |
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| Protein GI | 91793630 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000267205 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACCA TCGCAGAAAA ACCTGATTAT TCGCTATATT CCAATGCGTT TGGTTATTTG
CGCCAACCCC TAAATTTCAA ACCTACAGAA TCCGATGCAA ACGTGGTTGT GATAGGTTTA
CCTTTTGATT TGGCAACCAC AGGACGTTCT GGTGGTCGTA TGGGACCTGA AGCCATTCGC
CGTGCATCGG TGAATTTGGC CTGGGAAGAT ACTCGCTGGC CTTGGGATTT TAGCCTTAAT
CAGTGCATCA AGATTGTTGA TGCCGGTGAC TTAGTGTTTA ACTGTGGCGA TCAAGAAGAT
TTCACCACAC GTTTAGAAGC CTTCGCCACT CGCGTATTGG ATGCGGACAA AGGGCTATTA
AGCTTTGGTG GCGATCACTT TGTGACCTTG CCGTTATTGC GCGCTCACCA GAAGAAATTC
GGTAAAATGG CGCTGCTGCA TTTCGATGCC CATACAGACA CTTATAGCGA AGGTAGCAAG
TACGATCATG GCACCATGTT CTATCATGCA CCTCGCGAAG GCTTAATCGA CCTAGATCAT
TCAATGCAAA TTGGTATTCG TACCGATTAC ACCAAAGAAG GTCATGGTTT TGAAGTCATA
GATGCGGCCA TGGCCAATGA CTTGACGCCT GAGCAAATCG TTGAAAAAGT GCGCGCCCGT
ATTGGCGATA TGCCGTTATA CGTGACCTTT GATATTGACT GCTTAGATCC GGCTTTCGCA
CCAGGAACTG GTACGCCAGT ATGCGGCGGA TTAACCACAG ATAAAGCCAT GAAGATTATT
CGTGGCCTAC GTGGATTAAA TATCGTCGGC ATGGACGTAG TCGAAGTGGC GCCTTCTTAT
GACAGTGCCG ACATCACAGC CCTTGCTGGG GCGAGCCTAG GTCTTGAAAT GCTGCACGTG
TGGGCCGATG CCCATGGCTT CGTGAAGAAG TAA
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| Protein sequence | MTTIAEKPDY SLYSNAFGYL RQPLNFKPTE SDANVVVIGL PFDLATTGRS GGRMGPEAIR
RASVNLAWED TRWPWDFSLN QCIKIVDAGD LVFNCGDQED FTTRLEAFAT RVLDADKGLL
SFGGDHFVTL PLLRAHQKKF GKMALLHFDA HTDTYSEGSK YDHGTMFYHA PREGLIDLDH
SMQIGIRTDY TKEGHGFEVI DAAMANDLTP EQIVEKVRAR IGDMPLYVTF DIDCLDPAFA
PGTGTPVCGG LTTDKAMKII RGLRGLNIVG MDVVEVAPSY DSADITALAG ASLGLEMLHV
WADAHGFVKK
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