| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2229 |
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| Symbol | |
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| ID | 4018721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2650060 |
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| End bp | 2651208 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956251 |
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| Product | porin |
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| Protein accession | YP_563232 |
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| Protein GI | 91793581 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.218103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAG CATATTTAAC AGCACTCATT TCAGCATTAA TGGCGTCTCA AGCCGTCGCC
ATTGAGATAT ACAAAGACGA TACCAATAAG GTGAACATTG GCGGCTGGAT TGACGTGCGT
GCAATAGACA CTCAAGACGT TAGCGAAATC GCAAACGGCG CTTCGAGAAT TAATTTTGCG
TTCGAGCGCC AGTTAAAAAA TGACTGGCAC GCCTTTGCCA AACTCGAATG GGGTGTTGAC
CCTGTGGGCA CAGGTCGGGT GATTTACAAC GGCGATGAAA GCTTTGGATC CTCTCAAGAT
GACTTCATCT ATAACCGCTT GGGTTATGCC GGGCTTTCGC ATGCGGATTA TGGCAGTTTA
ACTATGGGTA AGCAGTGGGG AGCTTGGTAC GATGTCGTGT GCTACACCAA CTTAGCCTTC
TTTACCGATG GTAATGCATC AGGCACTTAC ACCTATAACA AGTTTGATGG TGCGGTAAAT
GGCACTGGCC GCGGTGATAA GATAGTGCAA TACCGTAATC GCTTAGGGGA TGTGTCTTTT
GCGGCGCAAG TTCAGCTAAA AAGCGAAAAA ATCACCTTAG ATAAAGCGAA TGACCCCCTT
GAAGTGAGTC GCCTTGATTA TTCGAACACC GCAGGTCTTG GGGTGACATA TCAAGTCAAT
GATCAATGGC TTATGACCTT AGGTGGCAAC TATGGTCAAG TGGAAGGCAA TCGCTTTGAT
GGCACAAGCT TTGATGAAAC AGATTATATC TATGGCTTTG GTTTTGCTTA CGGTTGGTGG
GATGTGGCCG GTTTTTACGC CGCGGCTAAT TTCAATTGGA ACCAGTTCCA TGATACCGAT
AACCTAAACC GAATGATCCC AGAATCAAAA GGCGTCGAGT CCATTATTGC TTACCAATAT
GACAATGGCA TTCGTTTCAT CTTGACCTAT AACTTACTCG AAGCCAGTGC AGAGTATGCC
AAGGCTTACC AAGGAGATGT GTTTAAGCGC CAATCTATGG TCGCCGGCGT GCATTACCTG
TTTGATACCA GCACTGTGGT GTTTGCTGAG TTTTCTAAAA ACTTAGGCGA TTTTAATGGC
CAAAGAGCAG CCGCAATGGA ATTGTCAGAA GATGATGCCT TGCTCATTGG CCTGCGTTAT
TCGCTGTAA
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| Protein sequence | MKQAYLTALI SALMASQAVA IEIYKDDTNK VNIGGWIDVR AIDTQDVSEI ANGASRINFA
FERQLKNDWH AFAKLEWGVD PVGTGRVIYN GDESFGSSQD DFIYNRLGYA GLSHADYGSL
TMGKQWGAWY DVVCYTNLAF FTDGNASGTY TYNKFDGAVN GTGRGDKIVQ YRNRLGDVSF
AAQVQLKSEK ITLDKANDPL EVSRLDYSNT AGLGVTYQVN DQWLMTLGGN YGQVEGNRFD
GTSFDETDYI YGFGFAYGWW DVAGFYAAAN FNWNQFHDTD NLNRMIPESK GVESIIAYQY
DNGIRFILTY NLLEASAEYA KAYQGDVFKR QSMVAGVHYL FDTSTVVFAE FSKNLGDFNG
QRAAAMELSE DDALLIGLRY SL
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