| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2227 |
|---|
| Symbol | |
|---|
| ID | 4018719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 2645211 |
|---|
| End bp | 2646500 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637956249 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_563230 |
|---|
| Protein GI | 91793579 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACAG ATAACAAGCT CAGTGGCATC ATAGCGAAGA AACACAGCTT CAGTGTCCCA
CTGGATTACC AACAAAGCCC CAGTGAACAG ATAAACCTCT TTGTGCGTGA ACTTTCAAGT
GTTGAACACC AAAATAAAGA ACTGCCCTAT TTGGTTTTCT TTCAAGGGGG CCCAGGGTTT
GGCGCCGTTA GGCCTGTTGC CAATACCGGT TGGATAAAGC GCGCCTTAAC TCAGTATCGA
GTCCTCTTAT TAGATCAAAG AGGCACCGGG CTTTCAACTC CTGTGAGCGC TGAGAGTCTG
GCTCATTTGA CCTCCCAGCA GCAAGCTGAA TACCTAAGTC ATTTTCGAAG TGATAACATC
ATTCGTGATG CAGAGCTCAT TCGCGCTAAA CTCAGCCCTG ATAGGCCTTG GAGCATTTTA
GGTCAGAGCT TTGGCGGCTT TTGTGTGCTG CGTTATTTAA GTGCCGCCCC ACAAGGGCTG
AAAGCCGCCT ATATCACTGG CGGCATTCCC TCCCTAGAAC GCAGTGCCGA TGAAGTCTAT
CAAGCGACCT ATCAAAGAGT ATTAGCTAAA AATCAGGATT TTTTCAGCCG TTTTAGTGAT
GCCAGAGAGC TTGCCAACAG GCTTGCCAGT CACATCAGTG AATATGAAGT ATTACTCAGT
TCAGGGGAGC GCTTAACCGT TGAAATGCTG CAACTGTTAG GTATAAATCT TGGCATGGAA
CAAGGCCCTG AGGGCGTGTA TTACTTGCTG GAACAAGCCT TAATCGACAC GGCCCAAGGG
GTTAAAGTGA ATCCGCTGTT TTTGCATCAG TTTGGTCAAT TTTTAGATTA CAACACCAAC
CCGCTGTTCG CCGTGCTGCA TGAGTCCATC TATTGTCAAA ATAGCGCCTC AAATTGGGCC
GCTCATCGAG TGCGTGAACA ATATAGTCAG TTTAATTATC ACCTCGGCAA AGATTTATTG
TTCACAGGTG AAATGGTTTA CCCTTGGATG TTCGATCAAT TCAGCCAACT TCAGCCCTTA
AAAGAAGCCG CCGAATTATT GGCCGCGAAA TCAGACTGGC CAGCACTGTA TGATCTCGAG
CAACTTAAAG CCAATACAGT GCCCGTCAGC GCCGCCATTT ACAGCGAAGA CATGTTTGTT
GAGATGCAGT ACAGCTTAGA AACCACTAAA GATGTAGGCA GCCTTAAGTA CTGGCTGACG
TCAGAATACG AGCACAATGG CATACGCATG GATGGCGAGC GAGTGCTGGA TAAGCTCATC
GCCCTTAATA CGGGGCGAGA GCTGAGATAG
|
|---|
| Protein sequence | MRTDNKLSGI IAKKHSFSVP LDYQQSPSEQ INLFVRELSS VEHQNKELPY LVFFQGGPGF
GAVRPVANTG WIKRALTQYR VLLLDQRGTG LSTPVSAESL AHLTSQQQAE YLSHFRSDNI
IRDAELIRAK LSPDRPWSIL GQSFGGFCVL RYLSAAPQGL KAAYITGGIP SLERSADEVY
QATYQRVLAK NQDFFSRFSD ARELANRLAS HISEYEVLLS SGERLTVEML QLLGINLGME
QGPEGVYYLL EQALIDTAQG VKVNPLFLHQ FGQFLDYNTN PLFAVLHESI YCQNSASNWA
AHRVREQYSQ FNYHLGKDLL FTGEMVYPWM FDQFSQLQPL KEAAELLAAK SDWPALYDLE
QLKANTVPVS AAIYSEDMFV EMQYSLETTK DVGSLKYWLT SEYEHNGIRM DGERVLDKLI
ALNTGRELR
|
|---|
| |