| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2219 |
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| Symbol | |
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| ID | 4018711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2634821 |
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| End bp | 2636707 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956241 |
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| Product | nitrous-oxide reductase |
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| Protein accession | YP_563222 |
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| Protein GI | 91793571 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4263] Nitrous oxide reductase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000181055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA ATAGCGAGAA TAAGAGCCTT GAACTCCAAG ACTCAAGCCG CCGCAGCTTT
ATGGGGCGCT CGGCACTAAT AGGTGCAGGC GCCGTTGCCG CGCCAATGAC GGCAGCCATG
TTTGCCTCTA TGGCAAAAGC ACAAACCCAA ACCCAAGGTG CTAGCGCCGT GGTGCATCCT
GGTGAACTTG ACGAATACTA TGGTTTTTGG AGCGGCGGTC ACTCAGGTGA AGTGCGTATT
CTAGGTATTC CTTCTATGCG TGAGCTGATG CGTATTCCAG TATTCAACAT AGACAGTGCT
ACAGGCTGGG GTATTACTAA CGAAAGTAAA CGCATTAAAG GTGACAGTGC CCATTTAATG
ACAGGCGACT CCCATCATCC ACACATGAGC ATGACCGACG GTAGCTACAA CGGTAAGTAC
GTTTTCATCA ACGATAAAGC CAACTCTCGT GTGGCTCGTA TTCGTTGTGA TGTGATGAAA
ACAGACAAGA TGATCACCAT TCCAAACGTG CAGGCGATTC ACGGTTTACG GGTACAAAAA
GTGCCTTATA CCAAGTATGT GATCTGTAAT GGTGAGTTCG AAATCCCCAT GAACAATGAT
GGCAAAGCGT CACTGGAAGA TGTCTCGACT TACCGCTCGC TGTTTAACGT GATTGATGCC
GAAAAAATGG AAGTCGCTTT CCAAGTGATG GTTGACGGTA ACTTAGATAA CACAGATGCG
GATTACGACG GTAAGTACTT CTTCTCCACC TGTTATAACT CAGAAATGGG CATGAACTTA
GGTGAAATGA TCACCGCTGA ACGCGATCAC GTGGTGGTAT TCAGTCTAGA GCGCTGTTTA
GCAGCACTAA AAGCGGGCAA GTTCACTAAC TACAATGGCA ACAAGGTGCC TGTACTTGAT
GGCCGAAAAG GGTCTGACTT AACCCGTTAT ATCCCTGTGC CTAAATCCCC ACACGGGATT
AACACGGCAC CAGATGGCAA GTACTTTGTC GCTAACGGCA AGTTATCACC CACGGTTTCT
GTGGTTGAAA TTGCCCGTTT AGATGATGTA TTTAGCGGCA AAATCCAGCC AAGGGATGCC
ATCGTTGCCG AGCCAGAATT AGGTTTAGGG CCACTGCACA CGGCATTTGA TAACAAGGGG
AACGCATTTA CGACCTTGTT CTTAGACAGC CAAATCGCTA AGTGGAATAT CCAAGATGCG
ATCAAGGCCT ACAATGGCGA AAAAGTAAAT TACTTGCGTC AAAAGCTTGA TGTGCATTAC
CAGCCAGGCC ACAACCATAC TTCACAGGGT GAAACCCGTG ATACTGATGG CAAGTGGTTG
GTTGTATTGT GTAAATTCTC TAAAGATAGA TTCTTACCTG TGGGGCCGCT TCGCCCAGAA
AACGATCAAT TAATTGATAT TTCTGGTGAT GAAATGAAGC TAGTTCACGA TGGCCCAACC
TTCGCAGAAC CCCACGATTG TATGATAGTG CACCGCAGTA AAGTGAAGCC ACAGAAGTTG
TGGACCCGTG ATGATCCTAT GTTTGCTGAC ACTGTTGCCA TGGCGAAGCA AGACGGTGTC
ACCTTAGAGA TGGACAACAA GGTTATCCGT GATGGTAACA AGGTGCGTGT TTACATGACC
TCTATCGCAC CCAACTTTGG CATGAATGAG TTCAAGGTCA AGCTAGGAGA TGAAGTGACG
GTTGTGGTGA CTAACCTTGA TCAGGTCGAA GACGTGACTC ACGGTTTCTG TATGACTAAC
CACGGGGTAC AGATGGAAGT GGCGCCACAG GCCACTGCTT CTGTGACCTT TATCGCCAAT
AAGCCAGGGG TGCAGTGGTA TTACTGTAAC TGGTTCTGTC ATGCACTGCA CATGGAAATG
CGCGGCCGTA TGTTAGTAGA AGCGTAA
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| Protein sequence | MSENSENKSL ELQDSSRRSF MGRSALIGAG AVAAPMTAAM FASMAKAQTQ TQGASAVVHP
GELDEYYGFW SGGHSGEVRI LGIPSMRELM RIPVFNIDSA TGWGITNESK RIKGDSAHLM
TGDSHHPHMS MTDGSYNGKY VFINDKANSR VARIRCDVMK TDKMITIPNV QAIHGLRVQK
VPYTKYVICN GEFEIPMNND GKASLEDVST YRSLFNVIDA EKMEVAFQVM VDGNLDNTDA
DYDGKYFFST CYNSEMGMNL GEMITAERDH VVVFSLERCL AALKAGKFTN YNGNKVPVLD
GRKGSDLTRY IPVPKSPHGI NTAPDGKYFV ANGKLSPTVS VVEIARLDDV FSGKIQPRDA
IVAEPELGLG PLHTAFDNKG NAFTTLFLDS QIAKWNIQDA IKAYNGEKVN YLRQKLDVHY
QPGHNHTSQG ETRDTDGKWL VVLCKFSKDR FLPVGPLRPE NDQLIDISGD EMKLVHDGPT
FAEPHDCMIV HRSKVKPQKL WTRDDPMFAD TVAMAKQDGV TLEMDNKVIR DGNKVRVYMT
SIAPNFGMNE FKVKLGDEVT VVVTNLDQVE DVTHGFCMTN HGVQMEVAPQ ATASVTFIAN
KPGVQWYYCN WFCHALHMEM RGRMLVEA
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