| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2178 |
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| Symbol | |
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| ID | 4018670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2580979 |
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| End bp | 2581857 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637956202 |
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| Product | WD-40-like beta propeller repeat-containing protein |
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| Protein accession | YP_563183 |
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| Protein GI | 91793532 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTA TTTGCTCTTC AATACCTCTG TTACTTTCTC TGTTAATCAT TAATTACCCA
AGTCATGCCC AAGATGACTC TCCTGTGCTC GATAGCTCCC ATATCATTGC GGTTAGTGGG
GCGGGATCAA AAATTTATTT AACTGATAGA GAAGGCCAAT CAAGTATTAA CATTCCCAAT
GTGACAGGTG ACTACGTAAC TTGGTCGCCA GACGGAAAAA AAATTGCTGT TCGACAATAT
CATGATGATG GAAAGACCTG GTCTATTCAT ACAATGAATA GTGATGGTAC GAATTGGAAA
CGATTGACTC ATGAAAAAAA TAAATGGGAT AGTGTCCCTG CATGGTCTCC AGATGGAAAA
AAAATAGTTT TTGCTAGGGA ATATAAGGAT CCGGAAGGCG TTTTTCAGGC TGAAATCTGG
CTGATGAATG CAGATGGTAG CAAACAGACT CAAATAGAAT CACTAAAAGG AAGTAACCCC
CATTTTACTC CAGATGGAAG AATCGTGTTT TCTTCGGAGT TCAACGATAA AAAAAGTGAG
ATTAGCATAG CAAATATCGA TGGTAGCAAG GTTATCCAGT TGACAGATAA TGAAGCTGAA
GAATGGCACC CTGAGGTTTC TCCTGATGGC AAGCACATCG CTTTTATGTC TAAAAGAGAT
GGAAATCAAG AAATTTATGT GATGAATAGT GATGGGTCTA ATCAAAAACG ATTAACATTC
AATAATGTTG GTGATTCTTT CCCTTCCTGG TCCCCCGACA GTTCCGAAAT ATTATTTACA
CACTTCGCGG ATACAGGATG GGATATCTAT ATTATGAATA AAGATGGTTC TTCATCAAGG
AAAATTCTCT CTGGTAGAGA TGCGATGTTT AAGCCTTAG
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| Protein sequence | MKSICSSIPL LLSLLIINYP SHAQDDSPVL DSSHIIAVSG AGSKIYLTDR EGQSSINIPN
VTGDYVTWSP DGKKIAVRQY HDDGKTWSIH TMNSDGTNWK RLTHEKNKWD SVPAWSPDGK
KIVFAREYKD PEGVFQAEIW LMNADGSKQT QIESLKGSNP HFTPDGRIVF SSEFNDKKSE
ISIANIDGSK VIQLTDNEAE EWHPEVSPDG KHIAFMSKRD GNQEIYVMNS DGSNQKRLTF
NNVGDSFPSW SPDSSEILFT HFADTGWDIY IMNKDGSSSR KILSGRDAMF KP
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