| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2133 |
|---|
| Symbol | |
|---|
| ID | 4018625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 2531082 |
|---|
| End bp | 2532152 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637956157 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_563138 |
|---|
| Protein GI | 91793487 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000021113 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTA AAAATTTTAA ATGTGTGCCA AAAATGATTT TTGGTCGTGG CTCGTTCGTG
CAATTAGACA CAGTGTTAGA GCAAGAGCGT ACCGACGCCA ATGATTTTGT GGTTTTCTTG
GTTGACGATG TTCACCAGCA CAAACCGTTA GCCGCTCGGG TACCAAACAA AGCCCATGAT
TTAGTGATCT ACGTTAACGT CGATGACGAG CCAACGACAG TACAGGTTGA TGAGTTAACG
GCTCAAGTGA AAGCCTTTAA TACTAAGCTT CCTGTGAGCG TAGTCGGCCT TGGCGGCGGT
TCAACCATGG ATTTAGCCAA AGCCGTGTCT TTGATGTTAA CAAACCCTGG CAGCTCATCT
GAGTACCAAG GCTGGGATTT AATCAAAAAT CCTGCTGTGC ACCACATTGG CATTCCTACG
GTATCGGGCA CTGGCGCCGA AGCATCACGC ACCGCGGTAT TGTGCGGCCC GGTACGTAAA
CTTGGCTTAA ACTCTGATTA CACTGTGTTT GATCAAATCA TCATGGATTC TGAGTTAATC
GCAGGCGTGC CAACGGATCA GTGGTTTTAC ACAGGTATGG ATTGCTTCAT TCACTGCGTT
GAGTCCCTAC AAGGCACTTA CCTCAATGAA TTTGCTAAAG CCTTCGCCGA AAAATCCATG
GATTTATGCC GTGAGGTTTA CTTAGACGAT CACCCAGAAA AAGATGACAA GTTAATGATG
GCATCTTACA TGGGCGGCAT GAGCATAGCT TACAGCCAAG TGGGCGCCTG TCATGCCGTG
TCTTATGGCC TAGGTTATGT GTTGGGTTAT CATCACGGTA TCGGCAATTG TTTAGCCTTT
GACGTGTTAG AAGAATTCTA CCCAGAAGGC GTGGCAGAGT TCCGTAAGAT GATGGAAATT
CATAACATCA CTCTACCAAA AAACATCTGT AAAGACTTGC CAGATGAGAC TATCGCTAAG
ATGGTGGCCG TGACTAAGAG CATGGGCCCG TTATGGGACA ATGTGTACGG CAAAGGCTGG
GAAGAGAAAG TGACCGATGA GATGCTGACT AAGCTATTCC GTCGCATTTA A
|
|---|
| Protein sequence | MSFKNFKCVP KMIFGRGSFV QLDTVLEQER TDANDFVVFL VDDVHQHKPL AARVPNKAHD
LVIYVNVDDE PTTVQVDELT AQVKAFNTKL PVSVVGLGGG STMDLAKAVS LMLTNPGSSS
EYQGWDLIKN PAVHHIGIPT VSGTGAEASR TAVLCGPVRK LGLNSDYTVF DQIIMDSELI
AGVPTDQWFY TGMDCFIHCV ESLQGTYLNE FAKAFAEKSM DLCREVYLDD HPEKDDKLMM
ASYMGGMSIA YSQVGACHAV SYGLGYVLGY HHGIGNCLAF DVLEEFYPEG VAEFRKMMEI
HNITLPKNIC KDLPDETIAK MVAVTKSMGP LWDNVYGKGW EEKVTDEMLT KLFRRI
|
|---|
| |