Gene Sden_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2125 
Symbol 
ID4018617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp2523691 
End bp2524143 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content42% 
IMG OID637956149 
Productredox-sensitive transcriptional activator SoxR 
Protein accessionYP_563130 
Protein GI91793479 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR01950] redox-sensitive transcriptional activator SoxR 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0226644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAATG AAACGGAGTT AAGTGTTGGC CAAATAGCCA AACGTTGTGG AGTTAAAGTA 
TCAACTTTGC ATTTTTATGA AGCCAAAGGG TTAATCTTTA GCCTGAGAAA TCAAGGTAAT 
CAACGCCGTT ATAAGCGCGA CATGTTAAGG CGTATCTCAG TGATAAAGGC GGCTCAAAGG 
ATGGGAATAA GCTTAGAAGA GATTAAGAAT GCTTTTGAAA GCTTGCCAAA CAAACGCACC 
CCCAATATTG ATGACTGGTC ACAACTTTCT AAAGCATGGA AAATGCAGCT CGAGCGGCGT 
ATTGCCTATA TGCAGGATTT AAGTGACTCT TTGGAGGCTT GTATAGGCTG TGGCTGTTTG 
AGCATGGCAA GCTGTCCTTT ATACAATCCA GAAGATATTT TAGCCACTGA AGGCGTTGGC 
TCAGTCTTAC TGGATAAGAG CATGGATTTT TAA
 
Protein sequence
MLNETELSVG QIAKRCGVKV STLHFYEAKG LIFSLRNQGN QRRYKRDMLR RISVIKAAQR 
MGISLEEIKN AFESLPNKRT PNIDDWSQLS KAWKMQLERR IAYMQDLSDS LEACIGCGCL 
SMASCPLYNP EDILATEGVG SVLLDKSMDF