Gene Sden_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2054 
Symbol 
ID4018546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp2438177 
End bp2438815 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content45% 
IMG OID637956078 
Producturidine kinase 
Protein accessionYP_563059 
Protein GI91793408 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTC AGCAATGTGT CATCATTGGG ATTGCCGGTG CGTCGGCTTC GGGTAAGAGT 
TTAATCGCGA AGACGATTTT TGACGAACTG CGCCGGGATC TGGGCACAGA TCAAATAGGC 
GTGATTAATG AAGATGCCTA TTATAAAGAT CAGAGTCATA TGTCCATGGA AGAAAGGGTC 
CAGACTAATT ATGATCACCC TAAGGCATTG GATCACCAGT TATTATGTAG CCACCTTAAG 
CAGTTAAAAG CGGGTCAAGC CGCAGATATC CCTTGCTACA GTTATACTGA GCATACTCGT 
ATTAGCGAGA CTATCCATAT GACGCCTAAA AAAGTGATCA TCTTGGAAGG TATTCTGCTG 
TTAACTGATC CAAAGCTGCG CGATCTGATG GATGCGTCCG TATTCATGGA TACGCCACTG 
GACATCTGTT TCCTGCGCCG CTTGACTCGT GACGTTGCCG AGCGTGACCG TACTATGGAG 
TCAGTGATTT CTCAGTACAA AAAAACCGTA AGACCTATGT TCTTACAGTT TATTGAGCCG 
TCAAAGCAAT ATGCGGATAT TATCGTGCCA AGGGGCGGAA AGAATCGTAT CGCGACCGAC 
ATTTTAAAGA CACGTATTCA GCATCTATTG GCTAAGTAA
 
Protein sequence
MNSQQCVIIG IAGASASGKS LIAKTIFDEL RRDLGTDQIG VINEDAYYKD QSHMSMEERV 
QTNYDHPKAL DHQLLCSHLK QLKAGQAADI PCYSYTEHTR ISETIHMTPK KVIILEGILL 
LTDPKLRDLM DASVFMDTPL DICFLRRLTR DVAERDRTME SVISQYKKTV RPMFLQFIEP 
SKQYADIIVP RGGKNRIATD ILKTRIQHLL AK