Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2027 |
Symbol | |
ID | 4018519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2402929 |
End bp | 2404176 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637956052 |
Product | glucose/galactose transporter |
Protein accession | YP_563033 |
Protein GI | 91793382 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCAG GCCACACACA GGCACAAGGG GAGGGCAATT ACCGTTTTGC TTTGGTCTCT TTGACATCAC TGTTTTTCAT GTGGGGTTTT ATCACCTGCT TGAATGACAT TTTAATCCCC CACCTTAAAG CGGTATTTTC TTTAAGTTAC ACAGAAGCCA TGCTTATTCA GTTTTGCTTC TTCGGCGCTT ATTTCCTGGT GTCCTTACCC GCGGGCAAAC TGGTGAATCG CTTAGGTTAT CAAAAAGGCA TAGTCACAGG TTTACTTATC GCAAGCCTAG GTTGTTTGCT GTTTTATCCC GCGGCGGCGC TGGCCACCTA TGGTCTGTTC TTAGGCGCGT TGTTTGTGCT CGCAAGCGGC ATCACTATAT TGCAAGTGGC GGCAAACCCC TATGTGAATG CACTGGGCAG TCAAGAAACG GCATCCAGCC GATTGAATTT GACTCAAGCC TTCAATGCCT TAGGTACTAC TGTGGCACCT TTTTTTGGCG CTGTGCTCAT TTTATCTGTG GCGTCTGGTG CCATAGGCGA TGCCGTTAGT GCACAGGCTG AAGCCGAAGT GGTAAAACTC CCTTACCTTA TATTGGCGGC TATGCTGGCG GTATTGGCGG TGATTTTTTC AAAGTTAAAT CTGCCGGTTA TTGCTGAGCA TCAAGTCAAA GATGAAAATC ACCTTGTTGA GCACAATGGC AAAACCAGTG CGCTGCAATC GACTCATTTA GTCTTAGGCG CTGTGGGTAT TTTTGTCTAC GTGGGCGCCG AGGTTTCCAT TGGTAGCTTC TTGGTGAACT TTTTAGGAGA GAGTCATATT GCCGGCCTTG AAGAAGCACA AGCGGCGAAA TACATCACCT ATTACTGGGG CGGCGCCATG GTAGGACGCT TTATTGGCTC GGCAGTGATG CAAAAAATCG CCGCTGGGAA GGTGTTGGCG TTCAATGCCT TAATGGCCGC AGCCTTAATC TTGCTGGCTA TGAACAGCAG CGGCGCCATT GCCATGTGGG CTATCTTGGC TGTGGGACTG TTTAATTCGA TTATGTTCCC CACTATCTTT AGCTTAGCCC TTAGAGATTT AGGCCCCCAC AGCTCTCAGG GCAGTGGTGT CTTGTGTTTA GCCATAGTAG GCGGTGCAAT AGTACCGCTA TTGCAGGGCA TCATGGCCGA CAGTATGGGA TTACAGCCGG CGTTTATTTT GCCGGTCATA TGTTACGCCT TCATCCTATT TTATGGTGCT AAGGGTTCAA ATATGTAA
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Protein sequence | MASGHTQAQG EGNYRFALVS LTSLFFMWGF ITCLNDILIP HLKAVFSLSY TEAMLIQFCF FGAYFLVSLP AGKLVNRLGY QKGIVTGLLI ASLGCLLFYP AAALATYGLF LGALFVLASG ITILQVAANP YVNALGSQET ASSRLNLTQA FNALGTTVAP FFGAVLILSV ASGAIGDAVS AQAEAEVVKL PYLILAAMLA VLAVIFSKLN LPVIAEHQVK DENHLVEHNG KTSALQSTHL VLGAVGIFVY VGAEVSIGSF LVNFLGESHI AGLEEAQAAK YITYYWGGAM VGRFIGSAVM QKIAAGKVLA FNALMAAALI LLAMNSSGAI AMWAILAVGL FNSIMFPTIF SLALRDLGPH SSQGSGVLCL AIVGGAIVPL LQGIMADSMG LQPAFILPVI CYAFILFYGA KGSNM
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