| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2004 |
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| Symbol | |
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| ID | 4018493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2376259 |
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| End bp | 2378784 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956026 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_563010 |
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| Protein GI | 91793359 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGGT TAACCATTAC CACTAAAAAA AGCCAACTTT CAGTACTCGT TGCCAGCGCA
CTATTAAGCA CGAGTATCGC CTTAAGCGGT TGTACGCCGG ATGCACCTTC AGCCTTAAGT
GAAAACTCAG CCTTAAGTGA AAATTCAGTC TTAAGTGAAA CTTGGGCCCC AGGTGCGCCA
GGCGCAGAAC CCACCTGGGC CTTTGCGGGT AAAACCGGCA TTGGCACGGC CTATGAGCCC
TATGTAGACG GCAAGTACCA AGCACAAGCA GCAAATCCTG TCAGTAAAGT CTGGTTCTCT
GTGGCCCAAG GCATTTTAAC CGAAACCATG TATGGCCTTA TTCATAATGC CCAGTTAAAA
GAACTGCAGT TTGTGATGAC AGGCAAAGGC TTTATCGATA CCGAAAAAGA CCACACCACA
AGCAGCATTG AATATTTACA CCAAGATGAC CAAGGCCGGC CGCAATCCCT TGCCTATAAA
ATAACCAATA AAGATATCGA AGGTAAATAT CAGATAGAAA AGCACATTTT CACTAATCCT
GATAACGACA GCCTAATGAT GAAGGTGATA TTTACCGCCT TCGAAGCGGG CATTACCCCT
CACCTTTATG TGAACCCCCA TATCGACAAC AGCGGCGCCA ATGACAGCGC GACAATAGAA
GATGGTGCAC TAATCGCCCA AACCCTAGCC GCAGACTCAA CTGTGATGAC AGTGAAAACC
AGCACTGAAT TTGTCAGCGC AAGCGCAGGC TTTGTTGGGG TATCCGATGG CTTATCGGAT
TTAATGGATA ACGGTAAGCT CGACTGGCGC TACACCAATA CCGGCAAACA AGCGGGCAAC
GTAGCGCTAA CGGCTCAGTA TCCTGAGCTC ACAATGAATA CCCCGCTGGA ATTTGATCTT
GTCATAGGTT TTGCAGCCGA TAAAGCCTCA AGCCTTGCCA CGGCAAACGC CAGTTTAGCC
CAAGGATCGG ACGCTGTGCT TAGCGCCTAT TTAGGTAATG ACAGTCACCT TGGCTGGAAA
GATTATTTAG CTAGCCTTAG CCCCCTTGAT GCCATGAGTC GCAGCACCAC AGATAATGGC
AAACTCTTGT ACGCCAGCGC ATTAGTGCTT AAGGCCCAAG AAGATAAGAC CCATGCGGGC
GCACTTATCG CCTCGCTCTC AAATCCTTGG GGTGACAGTG TTTCGGCTAA GGTTGGCAGC
ACAGGTTACA AGGCCGTGTG GCCGCGAGAC TTTTATCAAT GCGCCATGGC CTTCTTAGCC
ATGGGTGACA CCCAAACGCC GAAGGTGGCG TTCGAATACC TTAAAAAAGT GCAAGTGACC
AAAGACACAA AAGGTTATAG CGGCACGCCT GGATGGTTTT TACAAAAGAC CCATGTGGAC
GGTGAAATTG AATGGGTAGG TGTGCAGTTA GATCAAACCG CCATGCCCAT CATGCTCGGC
TGGAAACTCT GGCAGGCTGG GGTATTCACC GACGCCGAAA TAAGCCATTG GTATCACAGC
ATGTTAAAAC CTGCGGCAGA TTTTTTGGTT AATGGCGGCA AGGTGAAGCT CGACTGGAAT
GACACTCACA TCACCACCCC CAGCACTCAG CAAGAACGCT GGGAGGAGCA GCTTGGCTTC
TCGCCATCAA CCACAGCGGC GGTGATTGCA GGCTTAGTGG CGGCAAGCGA TATTGGCGCC
CTCGCCAAAG ATGAACAGGC ACAGCAATAC CTTGAATTTG CTAAAAAGCT TGAAGCGAAA
CTTGAAACTC AGATGGTGAC CCAAAATGGT TTATTGGGGC AAGAGTCTGA GATTGATGCA
AACACTGAAA AAAATCACTC TGAAATAGAC AAACCCGCAC CTTATTATGT GCGCATCAGT
CCCCAAGGTG ACCCGAATAC GGCAATAAAA CTCTTAGATA ACAATGGCAA ACCAGGCTTA
GATCAAAGAC TAATTTTAGA TGCGGGCTTC TTAGAATTAG TCCGCTATGG CGTGCGTGAT
GCAAAGGACC CCATCATAGC CAATAGCCTT GCCTTAGTGG ATCTTGAGCT TGAAGATAAC
TTAAGGCTTA AATATTTGTT CAGCGCCAAA GATGGCAGCA CAGTGCCAGG CTATCGCCGC
TATGGCAATG ATGGTTATGG TGAGGACACC CAAACCGGCC TAAGTTACGC AGAAAACGGC
AATACCGCAG ATCAGCGCGG CAGAGTCTGG CCATTTTTCA CTGGCGAGCG CGGTCATTAC
GAGCTGGCAT TAGCGTTATC GGGCACCTTA GTTGATGGCA AACTGGATGC TCAGCGTAAA
CAGGCTTTGA TTAACACTTA TGTTCAAGGC ATGGAAACCT TCGCCAATGA GGGCTTGATG
CTACCCGAGC AAGTGTGGGA TGGCGTGGGC AATAGCACAC GTTATGGTTA TCGTTTGGGT
CAAGGCACTA ACTCGGCAAC CCCCCTTGCC TGGACTCACG CCGAATACGT GAAATTAGTG
CGTTCGATGA CAGATGAAGC CTTGTGGGAT CATTATCCAA AAGTCAGCGC GACCTTTAGT
AAATAA
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| Protein sequence | MTGLTITTKK SQLSVLVASA LLSTSIALSG CTPDAPSALS ENSALSENSV LSETWAPGAP
GAEPTWAFAG KTGIGTAYEP YVDGKYQAQA ANPVSKVWFS VAQGILTETM YGLIHNAQLK
ELQFVMTGKG FIDTEKDHTT SSIEYLHQDD QGRPQSLAYK ITNKDIEGKY QIEKHIFTNP
DNDSLMMKVI FTAFEAGITP HLYVNPHIDN SGANDSATIE DGALIAQTLA ADSTVMTVKT
STEFVSASAG FVGVSDGLSD LMDNGKLDWR YTNTGKQAGN VALTAQYPEL TMNTPLEFDL
VIGFAADKAS SLATANASLA QGSDAVLSAY LGNDSHLGWK DYLASLSPLD AMSRSTTDNG
KLLYASALVL KAQEDKTHAG ALIASLSNPW GDSVSAKVGS TGYKAVWPRD FYQCAMAFLA
MGDTQTPKVA FEYLKKVQVT KDTKGYSGTP GWFLQKTHVD GEIEWVGVQL DQTAMPIMLG
WKLWQAGVFT DAEISHWYHS MLKPAADFLV NGGKVKLDWN DTHITTPSTQ QERWEEQLGF
SPSTTAAVIA GLVAASDIGA LAKDEQAQQY LEFAKKLEAK LETQMVTQNG LLGQESEIDA
NTEKNHSEID KPAPYYVRIS PQGDPNTAIK LLDNNGKPGL DQRLILDAGF LELVRYGVRD
AKDPIIANSL ALVDLELEDN LRLKYLFSAK DGSTVPGYRR YGNDGYGEDT QTGLSYAENG
NTADQRGRVW PFFTGERGHY ELALALSGTL VDGKLDAQRK QALINTYVQG METFANEGLM
LPEQVWDGVG NSTRYGYRLG QGTNSATPLA WTHAEYVKLV RSMTDEALWD HYPKVSATFS
K
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