Gene Sden_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1994 
Symbol 
ID4018483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2359039 
End bp2359626 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content47% 
IMG OID637956016 
Producthypothetical protein 
Protein accessionYP_563000 
Protein GI91793349 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000122059 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATC TATTTGCCCA CCTAGCCCGC ATGAAACTTA TTCAGCGCTG GCCATTAATG 
TACAACGTGC GTCGAGAAAA TGTGCAGGAG CATTCACTGC AAGTGGCCAT GGTGGCCCAT
GCGCTAGCCA TTATCAGCAA TAAAAAGTTT GCCACCCATT TAGATGTCAA CAAGACCGCC
ACCATCGCCA TTTTCCACGA TGCCAGCGAA ATATTAACCG GCGACTTGCC CACCCCGGTT
AAGTATTTCA ATAAAGAAAT CGAAGCCGAG TACAAGAAAA TTGAAGCCAT CGCCGAGCAG
CGCATGTTGG AGATGGTGCC AGAGGAGTTC AAGCAAGACT ACTTGAGCCT GTTTGACAGC
TCGGCTGCGG ATCCTGAGTA TAAAGCCCTA GTGAAATCCG CCGATACTTT GTGCGCCTAT
CTTAAGTGTC TAGAGGAACA AAAAGCCGGC AACAGTGAGT TTAATAGTGC TAAGCAGCGC
CTCGAGGCCA TGCTAGATGC CAACCCAAAC CCAGCGGTTA AATTTTTCAG GGACTGCTTT
ATTCCAAGCT TTACCTTAGA TTTAGATGAA ATTAACCAGA TGCTCTAG
 
Protein sequence
MSHLFAHLAR MKLIQRWPLM YNVRRENVQE HSLQVAMVAH ALAIISNKKF ATHLDVNKTA 
TIAIFHDASE ILTGDLPTPV KYFNKEIEAE YKKIEAIAEQ RMLEMVPEEF KQDYLSLFDS
SAADPEYKAL VKSADTLCAY LKCLEEQKAG NSEFNSAKQR LEAMLDANPN PAVKFFRDCF
IPSFTLDLDE INQML