Gene Sden_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1987 
Symbol 
ID4018476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2353298 
End bp2354059 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content49% 
IMG OID637956009 
Productalpha/beta hydrolase fold 
Protein accessionYP_562993 
Protein GI91793342 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000145275 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTTG TAGTCAGTGG CGAAGGCCAA GCAGTCGTCC TCATTCATGG TTTGTTTGGT 
GACTTAGATA ATTTAAAATC CTTAAGTCAT GAGCTTGAAA AAACCCACCA AGTTATTCGC
GTCGATGTGC CCAATCATGG GCTCAGCGAA CATTGGCAGC AGATGGATTA TCCCCTATTG
GCTGAAGCCG TGATCCAGTT ACTCGACACC TTAGACTTAA GCTCGGCGCA TTTAGTGGGC
CACTCCATGG GCGGCAAAAT CGCCATGGCC ACAGCGCTCT TGTATCCAGA ACGTATCGAT
TCTGTGGTGG CCGCCGATAT CGCCCCCGCC GCCTACCCAC CACGGCATCA AACTGTGTTT
GCTGGGCTCA ATAGCTTAGA TTTAGTCAAT ACCACTCGAA ATAGCGCCCT TGTTCATCTG
ACCGAGGCGG GAATAGACAA TGCCACGGCG CAGTTTTTAC TCAAGAGTCT GCGCCGTGCA
GAGGTGGGCT TTGGTTGGAA GATGAATCTT GAAGGCTTAA TCGCTAGTTA TGATAAATTA
ATCGCCTGGG ATATAGACGC GGCCCCATAC ACTAAAGCTG CATTTATCAT CAGAGGCGGT
GATTCAGATT ATGTGGGCGC CGAGCACAAA CAAGGGATTT TGGCCCAGTT CCCTAAGGTA
CAAGCCAAAA CCATTAATGG CGCGGGCCAT TGGCTGCACG CGCAAAAGCC TGAGATTTTT
AATCGTTTAG TGGCAGAATT TGTCGGTGAA CAGGGCCGTT AA
 
Protein sequence
MHFVVSGEGQ AVVLIHGLFG DLDNLKSLSH ELEKTHQVIR VDVPNHGLSE HWQQMDYPLL 
AEAVIQLLDT LDLSSAHLVG HSMGGKIAMA TALLYPERID SVVAADIAPA AYPPRHQTVF
AGLNSLDLVN TTRNSALVHL TEAGIDNATA QFLLKSLRRA EVGFGWKMNL EGLIASYDKL
IAWDIDAAPY TKAAFIIRGG DSDYVGAEHK QGILAQFPKV QAKTINGAGH WLHAQKPEIF
NRLVAEFVGE QGR