Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1978 |
Symbol | |
ID | 4018467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2341199 |
End bp | 2342056 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637956000 |
Product | ATPase |
Protein accession | YP_562984 |
Protein GI | 91793333 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTAT TGACTGACAT TTTTTGCCAG AAACCTAAAA GAGAGACGGC CATGACAACA GAGACTCATT ATGACACCCA AGCGGCGAAC AGCTGCTATT ACCAAGTTCA AGGCAGTGAA GTGGAGATTT TTAATTTCGC CAAGACTCAT GACTTGCCTG TGCTTATTAA GGGACCGACC GGTTGCGGTA AGACCCGCTT CGTGGAGTTT ATGGCAGAAA GTTTAGGCCG AGAGCTAGTG ACTGTCTCTT GCCATGATGA TTTAACCGCA GCAGATTTGC TGGGGCGTCA TTTAGTTAGC TCAGAAGGCA CCTTCTGGCA AGATGGCCCG CTGACCCGCG CGGTGCGCCA TGGGGGCATT TGCTATTTGG ATGAAATTAT CGAAGCCCGT AAAGACACCA CAGTAGTGCT GCACTCGTTA TCGGATCATC GCCGCGAGCT GCACCTTGAG CGCACCGGTG AAGTGATAAA GGCCCACAAA GATTTTATGC TGGTGGTGTC TTATAACCCA GGTTATCAGA ACATGATGAA GGGCCTTAAA CCCAGTACTC GACAGCGCTT TGTGGCCATG TCGTTCGATT ACCCAAGCCC AGAACAAGAA GCAGAAATTT TAGTCCATGA AGCGGGCATA ACCACTGAGC TTGCCCATAC CTTAGTCAAA TTAGGGGCGG ACATTCGCCG TTTAAGTGAT ATTGATTTAA AGGCGGCAGT CTCCACCCGG TTACTGATTT ATGCGGCGAA AATGATGTCC AGCGGTTGCC ATGCGCAGAT GGCGTGTTTG CATTGCATTA TTGAGCCGTT AACCGATGAG AAGCAGACAA TAGAAGCGCT AACCCAGCTT GTTAACGCAC ATTTCTAA
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Protein sequence | MNLLTDIFCQ KPKRETAMTT ETHYDTQAAN SCYYQVQGSE VEIFNFAKTH DLPVLIKGPT GCGKTRFVEF MAESLGRELV TVSCHDDLTA ADLLGRHLVS SEGTFWQDGP LTRAVRHGGI CYLDEIIEAR KDTTVVLHSL SDHRRELHLE RTGEVIKAHK DFMLVVSYNP GYQNMMKGLK PSTRQRFVAM SFDYPSPEQE AEILVHEAGI TTELAHTLVK LGADIRRLSD IDLKAAVSTR LLIYAAKMMS SGCHAQMACL HCIIEPLTDE KQTIEALTQL VNAHF
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