Gene Sden_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1978 
Symbol 
ID4018467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2341199 
End bp2342056 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content49% 
IMG OID637956000 
ProductATPase 
Protein accessionYP_562984 
Protein GI91793333 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAT TGACTGACAT TTTTTGCCAG AAACCTAAAA GAGAGACGGC CATGACAACA 
GAGACTCATT ATGACACCCA AGCGGCGAAC AGCTGCTATT ACCAAGTTCA AGGCAGTGAA
GTGGAGATTT TTAATTTCGC CAAGACTCAT GACTTGCCTG TGCTTATTAA GGGACCGACC
GGTTGCGGTA AGACCCGCTT CGTGGAGTTT ATGGCAGAAA GTTTAGGCCG AGAGCTAGTG
ACTGTCTCTT GCCATGATGA TTTAACCGCA GCAGATTTGC TGGGGCGTCA TTTAGTTAGC
TCAGAAGGCA CCTTCTGGCA AGATGGCCCG CTGACCCGCG CGGTGCGCCA TGGGGGCATT
TGCTATTTGG ATGAAATTAT CGAAGCCCGT AAAGACACCA CAGTAGTGCT GCACTCGTTA
TCGGATCATC GCCGCGAGCT GCACCTTGAG CGCACCGGTG AAGTGATAAA GGCCCACAAA
GATTTTATGC TGGTGGTGTC TTATAACCCA GGTTATCAGA ACATGATGAA GGGCCTTAAA
CCCAGTACTC GACAGCGCTT TGTGGCCATG TCGTTCGATT ACCCAAGCCC AGAACAAGAA
GCAGAAATTT TAGTCCATGA AGCGGGCATA ACCACTGAGC TTGCCCATAC CTTAGTCAAA
TTAGGGGCGG ACATTCGCCG TTTAAGTGAT ATTGATTTAA AGGCGGCAGT CTCCACCCGG
TTACTGATTT ATGCGGCGAA AATGATGTCC AGCGGTTGCC ATGCGCAGAT GGCGTGTTTG
CATTGCATTA TTGAGCCGTT AACCGATGAG AAGCAGACAA TAGAAGCGCT AACCCAGCTT
GTTAACGCAC ATTTCTAA
 
Protein sequence
MNLLTDIFCQ KPKRETAMTT ETHYDTQAAN SCYYQVQGSE VEIFNFAKTH DLPVLIKGPT 
GCGKTRFVEF MAESLGRELV TVSCHDDLTA ADLLGRHLVS SEGTFWQDGP LTRAVRHGGI
CYLDEIIEAR KDTTVVLHSL SDHRRELHLE RTGEVIKAHK DFMLVVSYNP GYQNMMKGLK
PSTRQRFVAM SFDYPSPEQE AEILVHEAGI TTELAHTLVK LGADIRRLSD IDLKAAVSTR
LLIYAAKMMS SGCHAQMACL HCIIEPLTDE KQTIEALTQL VNAHF