| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1948 |
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| Symbol | |
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| ID | 4018437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2306685 |
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| End bp | 2309411 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955970 |
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| Product | DNA gyrase, A subunit |
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| Protein accession | YP_562954 |
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| Protein GI | 91793303 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000559672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATC TGGCATCATC TATTTCGCCA ATTAATATCG AAGACGAACT AAAGAATTCT
TACCTTGATT ACGCCATGAG CGTAATCGTA GGCCGCGCAC TACCGGATGT ACGTGATGGC
TTAAAGCCTG TGCATCGCCG GGTGCTATTC GCCATGAGCG AATTAAAGAA CGATTGGAAT
AAACCTTATA AGAAATCCGC TCGTGTGGTC GGTGACGTAA TCGGTAAGTA TCACCCTCAT
GGTGATAGCG CCGTATATGA CGCGATTGTT CGTTTAGCGC AGCCGTTTTC ACTGCGTTAC
ACCTTAGTCG ATGGTCAAGG TAACTTCGGT TCGGTGGATG GCGATAGCGC GGCAGCAATG
CGTTATACCG AAATCCGTAT GCAGAAATTA GCCCATTCAC TACTGGCTGA TCTTGAAAAA
GAAACCGTGG ATTTTGTGCC TAACTATGAC GGCACTGAAA TGATCCCTGC GGTATTGCCG
ACTCGGGTAC CTAACCTGTT GATCAACGGT TCATCGGGTA TCGCTGTAGG TATGGCGACG
AATATTCCAC CACACAACTT AACGGAAGTG GTTAAAGGCT GTTTAGCCTT AATCGATGAG
CCAAGCTTGT CCATTGAACA GTTGATGGAA TATATCCCAG GCCCAGATTT CCCAACGGCA
GCGTCTATCA ACGGTCGTAA AGGCATTATT GATGCCTATA AAACCGGTCG CGGCCGCGCA
GTAATGCGCT CAAAAGCTGA AATTGAAACC GAAGATAACG GCCGCGAGCG TATTATCGTT
CACGAAATTC CGTACCAGGT GAACAAAGCC CGCCTAATTG AGAAAATTGC CGAGCTAGTC
AAAGACAAGA AAATCGAAGG CATTAGCGGT TTACGTGATG AGTCTGATAA AGACGGCATG
CGTATCGTGA TTGAAATCAA ACGCGGCGAA GTGGGCGAGG TAGTATTAAA CAACCTTTAT
GCCCAAACTC AGATGCAGTG TTCTTTTGGC ATTAACATGG TGGCGTTAAC CAACGGCCAA
CCTAAGTTAT TTAACCTGAA AGAAATGCTT GAGTGCTTTA TTCTTCACCG CCGTGAAGTG
GTCACCCGCC GCACCGTATT CGAACTGCGT AAAGCCCGCG AACGTGCGCA TATTTTAGAA
GCGTTAGCCA TAGCACTGGC AAACATTGAC CCGATTATCG CGTTAATCAA AGCCTCGCCA
ACACCAGCAG AAGCTAAGCT GCAATTGGTT GCACAAGGTT GGGAACTTGG CCATGTACAA
GGCATGCTTG AAAAAGCCGG CGATGATGCG GCGCGTCCTG AATGGTTAGA GCCAGAATAC
GGCATCCGTG ATGGTCAATA CTTCCTCACT GAGCAGCAAG CCCAGGCGAT TCTTGAGTTA
CGTCTTCACA GATTAACTGG CCTTGAACAT GAAAAAATTC TGTCAGAATA TGAAGAATTA
TTGATTGTTA TTGCGGGACT ACTGCTTATT CTTCGTAGCC CAGAGCGTTT GATGGAAGTC
ATCAAGGAAG AGCTTGAAGA AGTGCTTGAG CAATACGGTG ACGTGCGCCG CACCATAATC
AACGAAAACG AAATCGATAT GAGTCTTGAA GATCTTATCA ATGAAGAAGA CGTTGTGGTG
ACCTTGTCTC ACACAGGTTA TGCCAAGTAC CAGCCGTTAT CTGATTACCA GGCTCAGCGC
CGTGGTGGTA AAGGCAAGGC TGCGACCAAG GTAAAAGATG AAGATTTCGT CGAGAAACTA
CTGGTGGCGA ATACACACGA CACCATATTG TGCTTCTCAG ACTTCGGTAA GATGTACTGG
CTAAAAGTGT ATCAATTACC GCTTGCGAGC CGTACAGCCC GTGGTCGACC TATTGTTAAC
TTGCTGCCGC TATCCGATGG CGAGCGTATC ACGGCTATAT TGCCAGTGCG TGAATACGCC
GATGATAAGT TTATTATCAT GGCGACTGCT CACGGTACGG TGAAGAAAAC GGCGTTAACG
GCTTACAGCA ATCCAAGAGC GAACGGCATT ATTGCGGTGA ACTTAAAAGA TGGCGATCAG
CTGATTGGCG TTGATATTAC TGACGGCAGC GACGACATCA TGTTGTTCTC TAACGAAGGT
AAAGTGGTAC GTTTCAACGA GAAAGCGCGC GACTCTGAAA CCGGTGAAGT GAAGATTGAC
GCCGAAACTG GCGAAGAAAT CATTGCGCTG CGTCCAATGG GCCGCACCGC AACCGGCGTT
CGTGGTATTA AGCTTGAAGA TGGCCAGAAA GTGGTTTCAC TTATTGTGCC TAAAGGCGAT
GGCGCTATCT TAACTGTGAC CGAAAACGGT TATGGCAAGC GTACTGAACT GAATGAATAC
CCAGCTAAGA GCCGCGGCAC TAAAGGTGTG GTTTCTATCA AGGTCACAGA ACGTAACGGC
GCCGTTGTTG GTGCTGTGCA AGTGGGTGAG TTTGATGAAA TTATGCTTAT CAGTGATAAA
GGCACCTTAG TACGTACCCC AGCTGAAGGC GTGTCCATTA TAGGCCGTAA CACTCAAGGC
GTGACCATCA TTCGCACCGC AGAAGACGAG AAAGTCGTCG GTTTGCAGCG CATTGAAGAA
ATTCAAACTG ATGAGATCCT CGATGCCGAC GGCAACGTGA TAGTGCCTGC TGAGTCTGTC
GATGGTGATG AGCTAAGCAC TGATACTCGT GCTACAGCCA CTGAAGCCCC TGCTCAAACA
GACAGTGCTG AAGACGAGCA AGAATAA
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| Protein sequence | MTDLASSISP INIEDELKNS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMSELKNDWN
KPYKKSARVV GDVIGKYHPH GDSAVYDAIV RLAQPFSLRY TLVDGQGNFG SVDGDSAAAM
RYTEIRMQKL AHSLLADLEK ETVDFVPNYD GTEMIPAVLP TRVPNLLING SSGIAVGMAT
NIPPHNLTEV VKGCLALIDE PSLSIEQLME YIPGPDFPTA ASINGRKGII DAYKTGRGRA
VMRSKAEIET EDNGRERIIV HEIPYQVNKA RLIEKIAELV KDKKIEGISG LRDESDKDGM
RIVIEIKRGE VGEVVLNNLY AQTQMQCSFG INMVALTNGQ PKLFNLKEML ECFILHRREV
VTRRTVFELR KARERAHILE ALAIALANID PIIALIKASP TPAEAKLQLV AQGWELGHVQ
GMLEKAGDDA ARPEWLEPEY GIRDGQYFLT EQQAQAILEL RLHRLTGLEH EKILSEYEEL
LIVIAGLLLI LRSPERLMEV IKEELEEVLE QYGDVRRTII NENEIDMSLE DLINEEDVVV
TLSHTGYAKY QPLSDYQAQR RGGKGKAATK VKDEDFVEKL LVANTHDTIL CFSDFGKMYW
LKVYQLPLAS RTARGRPIVN LLPLSDGERI TAILPVREYA DDKFIIMATA HGTVKKTALT
AYSNPRANGI IAVNLKDGDQ LIGVDITDGS DDIMLFSNEG KVVRFNEKAR DSETGEVKID
AETGEEIIAL RPMGRTATGV RGIKLEDGQK VVSLIVPKGD GAILTVTENG YGKRTELNEY
PAKSRGTKGV VSIKVTERNG AVVGAVQVGE FDEIMLISDK GTLVRTPAEG VSIIGRNTQG
VTIIRTAEDE KVVGLQRIEE IQTDEILDAD GNVIVPAESV DGDELSTDTR ATATEAPAQT
DSAEDEQE
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