Gene Sden_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1941 
Symbol 
ID4018430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2297521 
End bp2298678 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content50% 
IMG OID637955963 
Productbutyryl-CoA dehydrogenase 
Protein accessionYP_562947 
Protein GI91793296 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA ATTTTAATGA CGATCAGCGC CAATTTGCCG AACTTGCCAG ACAATTTGCC 
ACTGATGAAT TAGCCCCGTT TGCAGCAAAA TGGGATGAAG AACATCATTT CCCCAAAGAT
GTTATCCAAA AAGCCGGCGA GTTAGGTTTT TGCTCACTCT ATTCCCCAGA ATCTGAAGGC
GGCATGGGCC TGTCTCGTCT TGATTCATCG ATTATATTTG AAGAATTATC AAAAGGTTGC
ACCGCAACCA CCGCCATGCT GACCATACAT AATATGGCCA CCTGGATGAT CACCACTTGG
GGCACACCGG CCCTGCGTAA GACGTGGTCT GAAGGCTTAA CCACAGGTCA GCTGTTGGCC
TCTTATTGCT TAACTGAGCC AGGTGCTGGC AGTGATGCCG CCTCTTTACA AACCAAAGCA
GTGCGTGATG GCGAGCATTA TGTGCTTAAT GGCTCAAAAG TGTTTATCTC AGGCGCTGGC
GCCACCGAAA TGTTGGTGGT GATGTGCCGT ACAGGTGAAG CGGGCGCTAA AGGCATTTCT
GCCATTGCAG TGCCTGCCGA CCTTGATGGC ATCATCTACG GCAAGGCCGA AGATAAAATG
GGCTGGAACG CTCAGCCAAC TCGTCAAATT ACCTTCGATA ACGTTCGCGT ACCAGTGGAT
CATTTACTCG GTGAAGAAGG CCAAGGCTTT ACCTTCGCCA TGAAGGGCTT AGATGGCGGT
CGCATCAATA TCGCCACTTG CTCGGTTGGC ACGGCCCAAG CCGCGCTTGA GCGTGCGACC
CAATACATGA ATGAGCGTAA ACAGTTTGGT AAACCCTTAG CTGCCTTTCA AGCACTGCAA
TTTAAGCTTG CGGACATGGC AACTGAACTG GTTGCCGCTC GTCAAATGGT GCGCCTTGCG
GCCTTTAAAT TGGATAACCA AGATCCCGAA GCCACCGCCT ATTGCGCCAT GGCAAAACGC
TTTGCCACCG ACATAGGCTT TAGCGTCTGT GACAGTGCGC TGCAAATTCA CGGCGGCTAC
GGATATATTC GTGAGTATCC CCTAGAGCGC CATTTCCGTG ATGTGCGGGT GCATCAGATT
TTAGAGGGCA CCAATGAAAT AATGCGTCTA ATTATTGCCC GCCGTTTATT AGCTGAAAAC
GCCAACGCCA TACTGTAA
 
Protein sequence
MDFNFNDDQR QFAELARQFA TDELAPFAAK WDEEHHFPKD VIQKAGELGF CSLYSPESEG 
GMGLSRLDSS IIFEELSKGC TATTAMLTIH NMATWMITTW GTPALRKTWS EGLTTGQLLA
SYCLTEPGAG SDAASLQTKA VRDGEHYVLN GSKVFISGAG ATEMLVVMCR TGEAGAKGIS
AIAVPADLDG IIYGKAEDKM GWNAQPTRQI TFDNVRVPVD HLLGEEGQGF TFAMKGLDGG
RINIATCSVG TAQAALERAT QYMNERKQFG KPLAAFQALQ FKLADMATEL VAARQMVRLA
AFKLDNQDPE ATAYCAMAKR FATDIGFSVC DSALQIHGGY GYIREYPLER HFRDVRVHQI
LEGTNEIMRL IIARRLLAEN ANAIL