| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1931 |
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| Symbol | |
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| ID | 4018420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2288471 |
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| End bp | 2289295 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955953 |
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| Product | helix-turn-helix, AraC type |
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| Protein accession | YP_562937 |
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| Protein GI | 91793286 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATATCA GTACTACAAT GTTGTTAGAC TATAACCCGA CTCAAGGAAA AGTCGCTGAT
GGCCGTGCCT ATAAAACGCG GCAGCCATTG CCGCCGTTAA ATCGTTGGGT GCAATCGTAT
TGGCAGCTCA CTGTCTCCAA AGGCCAGTTT CAATACCATA GTGTGCCGGA TAACTGCGTT
GATTGGATCA TCAATCTAGG TTGTTTCGAC GACAACTTTT TTATTCCACC ATTTCTCTCG
TCTACTTTAT TCCATATTGA TGGCCCAGCG TCTTTTTTTG GCATTCGTTT TCGAATTCTA
GGACATAAAG GCTTGATCTC TCTGCCTTTA GGGGAGTGGG GTGAGGCTGG AAGTGTAAAG
GCGGAAGACT TACTACCTGC GGATATCGTT TACACAGTAT TTGAAGCCAT TGATAACGCA
AAGAGCTTTG ACAAGCGCTG CTATAGCTTG TCGGCAGTCA TACTATCTGC CATAACGTTT
GCCGACGTTG ACCCTCGCCT AGCTCGTTAC ATTCGATACT GTTACGAAAA TGTCAGCTCT
AATCTTGACC TGTCAGATAG CCAGAGCTCT AAATTTGGTG TGTCTGCACG TCAGCTTAGA
CGGTTGGCCA AACAGCACGT TGGCTTGCTT CCCAAAGATT TTGGCAAGGT GCTAAGATTT
CAGAGTGCTC TCAAAGCGAT GAATGCACCG CAAAACAACA AGACCTACCT AGATTATTAC
TACGATCAGC CCCATTTTGT GCGTGAATTT AAACGTTTGT CTGGAGTTAC GCCGACACAG
TTCAGGAAAA TGTCCGTTTT ATACAATCAT TACTCTTCTG AGTGA
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| Protein sequence | MYISTTMLLD YNPTQGKVAD GRAYKTRQPL PPLNRWVQSY WQLTVSKGQF QYHSVPDNCV
DWIINLGCFD DNFFIPPFLS STLFHIDGPA SFFGIRFRIL GHKGLISLPL GEWGEAGSVK
AEDLLPADIV YTVFEAIDNA KSFDKRCYSL SAVILSAITF ADVDPRLARY IRYCYENVSS
NLDLSDSQSS KFGVSARQLR RLAKQHVGLL PKDFGKVLRF QSALKAMNAP QNNKTYLDYY
YDQPHFVREF KRLSGVTPTQ FRKMSVLYNH YSSE
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