| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1883 |
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| Symbol | ruvB |
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| ID | 4018371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2210739 |
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| End bp | 2211752 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955904 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_562889 |
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| Protein GI | 91793238 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.679092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGAAG CAGATAGATT AATTCAGCCC CAAGTCCTTG CTCAAGATGA GCATATAGAC
AGGGCCATGC GGCCAAAACT CTTAGATGAC TACACGGGTC AAGATGACAC TCGCGCTCAG
CTTAAAATCT TCATTCAAGC GGCCATAAAC CGTAAAGAAG CCTTAGATCA TATGTTGATC
TTCGGCCCGC CAGGTTTAGG TAAAACCACC TTGGCGATGA TTGTTGCCAA TGAGATGGGC
GTCAACATTA AGTCCACCTC AGGCCCAGTG CTAGAAAAGG CCGGCGACTT GGCGGCATTA
CTGACCAATT TAGATGAAGG CGATGTGCTT TTTATCGATG AAATTCATCG TTTAAGCCCT
GTGGTGGAAG AAATTCTCTA TCCCGCCATG GAAGATTATC AGCTGGATAT CATGATAGGT
GAGGGACCTG CGGCTCGTTC AATCAAGTTA GACTTGCCGC CTTTTACCTT GATTGGCGCC
ACCACGCGGG CAGGGGCATT AACCTCACCG CTCAGAGCCC GTTTTGGAAT CCCTTTGCGG
TTAGAGTTTT ATAACGTCAA AGACTTATGC ACTATCGTTA CCCGCTCAGC CAAAGTGATG
GAGCTTGCAA TCGATGCCGG CGGCGCCCAT GAAATCGCAA AACGCTCTCG CGGCACGCCA
CGTATTGCCA ATCGATTACT GCGCCGTGTG CGGGATTACG CCGAAGTGAA ATTTGCCGGT
GAAGTCACAG AAGATGTCGC CCAGCAAGCA TTAGATATGC TAGATGTGGA TCAAGAAGGC
TTCGATTATC TCGACCGTAA GCTATTGTTA TCCATCATAG ATAAATTTAT GGGTGGCCCT
GTGGGGCTAG ATAACTTAGC CGCCGCCATT GGTGAAGACA GGGAAACCAT AGAAGACGTG
TTGGAGCCTT TCTTAATTCA GCAAGGATTC ATCCAGCGTA CCCCAAGGGG GCGCATCGTT
ACCCCAAGGG CGTACCAACA TTTCAATATC ATCACCCCCG ATGTACCCAA GTAG
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| Protein sequence | MIEADRLIQP QVLAQDEHID RAMRPKLLDD YTGQDDTRAQ LKIFIQAAIN RKEALDHMLI
FGPPGLGKTT LAMIVANEMG VNIKSTSGPV LEKAGDLAAL LTNLDEGDVL FIDEIHRLSP
VVEEILYPAM EDYQLDIMIG EGPAARSIKL DLPPFTLIGA TTRAGALTSP LRARFGIPLR
LEFYNVKDLC TIVTRSAKVM ELAIDAGGAH EIAKRSRGTP RIANRLLRRV RDYAEVKFAG
EVTEDVAQQA LDMLDVDQEG FDYLDRKLLL SIIDKFMGGP VGLDNLAAAI GEDRETIEDV
LEPFLIQQGF IQRTPRGRIV TPRAYQHFNI ITPDVPK
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