| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1851 |
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| Symbol | |
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| ID | 4018334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2176556 |
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| End bp | 2177989 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955868 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_562858 |
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| Protein GI | 91793207 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000190326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAACC ATTCCCAGCC TACAGGCGCT GATTACAATT ACACCGTCGT CCGCCAGTTT
GCCCTAACCA CAGTCTTGTG GGGTATTTTT GGTATGGCCG TAGGTGTATT GATTGCGGCC
CAGTTAATCT GGCCACAGCT GAACTTCGAA ACCCCTTGGT TAACCTTTAG TCGCTTGCGA
CCATTACATA CCAATGCGGT GATTTTCGCG TTCGGCACTT CAGCCCTTTT CGCAACCTCT
TACTATGTCG TACAACGCAC TTGTCAAACC CGTTTGTTTG CACCTAAATT AGCTGCATTC
ACCTTCTGGG GCTGGCAAGC CATTATTATA TCAGCTGCTA TCTCCTTACC TATGGGTTTC
ACCCAAGGTA AAGAATATGC CGAGCTAGAA TGGCCGATTG ATATCGCCAT CGCACTCGTC
TGGGTCAGCT ATGCCATAGT GTTCTTCGGC ACTATTATCA AACGTACCAC CTCACACATT
TATGTGGCGA ACTGGTTCTT TGGTGGTTTT ATCATTACCG TTGCCGTATT GCATATCGTT
AACTCCATGG CAGTGCCTGT GAGTATGACT AAGTCTTACT CCCTCTACTC TGGCGCTGTT
GATGCCATGG TACAGTGGTG GTACGGCCAT AATGCAGTAG GTTTCTTACT GACAGCGGGC
TTCTTGGGCA TGATGTATTA CTTCGTGCCT AAGCAAGCGG GTCGTCCTGT GTACTCTTAC
CGTTTATCCA TCGTCCACTT CTGGGCCTTG ATTGCCCTGT ACATTTGGGC CGGTCCTCAC
CACTTACATT ACACTGCGCT GCCTGACTGG ACTCAGTCTT TAGGTATGGT GATGTCGTTA
ATTCTATTCG CACCTTCGTG GGGCGGGATG ATTAACGGTA TCATGACCTT ATCCGGTGCA
TGGCATAAAC TGCGTACCGA TCCTGTGTTG CGTTTCTTAG TGGTCTCATT GTCTTTCTAT
GGTATGTCTA CCTTCGAAGG CCCAATGATG GCAATCAAGA CAGTAAACGC CTTATCTCAT
TACACGGATT GGACCATAGG ACACGTACAC TCAGGCGCGC TAGGCTGGGT TGCTATGGTG
TCTATCGGTT CGTTATACCA CTTAATTCCT GTGCTATTTG GCCATGGCCG CATGTACAGC
TCGAATCTTG TGAACGTGCA TTTCTGGTTA GCGACTATCG GTACTGTGCT TTATATCGTC
TCTATGTGGA TATCGGGTGT GATGCAAGGT CTGATGTGGC GTGCAGTGAA TGCCGACGGT
ACATTAACCT ATAGCTTTGT TGAAAGCTTA GAAGCGTCTT ATCCGTTCTA CTTCGTGCGC
TTCCTAGGTG GTGTGTTCTT CTTAACTGGC ATGTTCTTAA TGGCGTATAA CGTGATTAAA
ACCGTTAACG CTGAGAAAGA TTCATTGCCT GCCATCCCAG ATGAAGCAGC TTAA
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| Protein sequence | MMNHSQPTGA DYNYTVVRQF ALTTVLWGIF GMAVGVLIAA QLIWPQLNFE TPWLTFSRLR
PLHTNAVIFA FGTSALFATS YYVVQRTCQT RLFAPKLAAF TFWGWQAIII SAAISLPMGF
TQGKEYAELE WPIDIAIALV WVSYAIVFFG TIIKRTTSHI YVANWFFGGF IITVAVLHIV
NSMAVPVSMT KSYSLYSGAV DAMVQWWYGH NAVGFLLTAG FLGMMYYFVP KQAGRPVYSY
RLSIVHFWAL IALYIWAGPH HLHYTALPDW TQSLGMVMSL ILFAPSWGGM INGIMTLSGA
WHKLRTDPVL RFLVVSLSFY GMSTFEGPMM AIKTVNALSH YTDWTIGHVH SGALGWVAMV
SIGSLYHLIP VLFGHGRMYS SNLVNVHFWL ATIGTVLYIV SMWISGVMQG LMWRAVNADG
TLTYSFVESL EASYPFYFVR FLGGVFFLTG MFLMAYNVIK TVNAEKDSLP AIPDEAA
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