| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1846 |
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| Symbol | |
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| ID | 4018329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2171750 |
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| End bp | 2174191 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955863 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_562853 |
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| Protein GI | 91793202 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.418126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCT GCTTTCATTG TGCTGAACCT TTTATTCAGG TGCCTTTGTA TACCCAAATT
AATGGTACTG CGCAGCCTAT GTGCTGCCCT GGCTGCCAAG CCGTGTCTCA GGCGATCATG
GATGCGGGGC TCATGAGCTA CTATCAATAT CGCAGTGAAC CTGGCATGAA GCAGACAGGC
TTAGTGCCTG AGCAGCTGTC CCATTTTAGT GCCTACGACT TAGCCGAAGT ACAGCAAGAT
TTTGTCCATC AGCAGGATAT ATTAAGCACG ACCTCGTTAA CCATCACGGG CATGAGCTGC
GCCGCCTGTG CCTGGCTTAT CGAACACAGA TTGTCCCCCA TTGAAGGTAT TGCCAAGGTA
TTGGTTAACT CAACCACTCA AAGGGCCATG ATAAGCTGGG ACAACAGCCA GGTTAAACTG
AGTGAAATCT TGACTCAAAT TAGTCAAATT GGTTATCAAG CCGCGCCGTA TCAGCAAGAC
GAGCAAGAGA AGCAGCATCA TAAAGACAGC CGCACCTTTT TACTGCGATT AGGCTTAGCG
GGTTTTGCTA CCATGCAGGT GATGATGTTT GCCTTGGCGT TATACACTGG CTACTTTAGG
GATCTCGATG AGGCTATTCG TGATTACTTT CGTTGGGTCA GCATGATTTT TGCCGCCCCT
GTGGTGCTTT ATTCGGCGCA GCCTTTCTAT TTTAGTGCCC TTCGCAGCCT GCTTAGCGGC
AAACTCAATA TGGATGTTTC TGTGTCTATC GCCATTGGCG GTGCCTTTAC CGCCAGTTGT
GTCGCGACTA TCAATGGTAC AGGTGAAGTG TATTTTGAAT CTGTATCCAT GTTTACCTTC
TTCTTATTGC TGGGGCGCTA TTTTGAGCAA AATGCGCGAA GACGCGCCAG TATTAGCAGT
AATAATTTGC ATAAACTCGT GCCGCTCACC GCTTTACGTC TCGATGGCAA TCAACAGACA
GAAATCCCTG CGAAAAGTTT ACGCTTAGGG GACATCATTC TGGTGCGTCC TGGGGATGCC
TTCGCCGCCG ATGGGGTGGT GATTGATGGC AGTTCAAGCG CCAACGAAGC TATGCTCACT
GGCGAGCAAA TGCCGGTGGA TAAAAATCTG GATTGCCCTG TGTTTGCGGG CACCCTCAAT
GTTGAGCAAC CTCTGCAAGT GAGAGTGACC GCCCTTGGGC AAGATCAACT GGTGGCGGAA
ATCATTCGCC TGCAGGAAAT CGCTGCGGCA AATAAGCCTG CCATCGCTTT TATGGTGGAT
AAATTGGCCC GTTATTTCTC AGCCACCATC TTAACCACGG CGTTAATCAC GTATTTAGTC
TGGCTACAAA TCTCCCCAGA TGATGCGTTT TGGGTGACCT TATCTGTCCT TGTGGCCACC
TGCCCCTGCG CTTTGGCATT AGCCACCCCA ACCGCAGTCA CTTGCGCTAC GGCTATTTTT
ACTCGTTTAG GCATCATCAC TCGTAAAGCC GGCGTATTTG AAAAGCTTGC CAGCATAGAA
CAAGTCGTAT TCGACAAAAC CGGCACTTTA ACTCGAGGGC ATATCGCCTT AGGTGCGCTA
AGCATTATTG ATCCGCAGCA AAACAAGGGC GACGTGCTCA CTGAGAAGCA GATGCTAGCC
ATAGCCGCTG CATTGGAGGC GGGTTCATTA CACCCTATTG CGCTGGCTTT TAGTCGGCAT
TATGACCCTA ATGTGATTGC TACAGAGATA GCCCATTTTG TGGCTCAAGG CATTGAAGGC
AAAGTACAAG GTCAAGTATA TCGAATAGGT GTTAAAGCAT TCGTTCAAGG CAATATGAGC
CTTACAGCAA GTGACAGCCA AACAACTGAT AACACTAAAC CCACTCCCGA TACTTCTCCC
TGTGTTTGGC TGAGTCAAAA TGGCCGTCTC ATTGCCAGTA TACCAATACA GGATGAAGTG
CGTAGCGATG CAAAACAGGC GGTTGAGGCA CTGCAACAGG CCAATATTCA GGTCTGCATT
GCCAGCGGAG ACAGCTTAAG TCATGTCAAT GCCTTAGGGC ATACCTTAGG TATTCATCAA
GTATATGCCG AACAAAAGCC CCAAGATAAA CTGACGTTAA TTAACCAATT GCAACTCAGT
CACAATACCG CCATGTTTGG TGATGGCATT AATGATGCGC CTGTGCTGGC GGGGGCTTAC
TTGTCGGTCG CCATGGGCAG TGGCAGCGCG ATTGCCAAAA ACAGTGCCGA TCTGATTTTA
CTTGGGGATC ATTTATCCCG CTTCAACGAT GCCATCAAGG TGGCGAAAAA AGCCAATGCT
ATTATTAAAC AGAATTTATT CTGGGCTTTT GGCTATAACC TATTGATTTT ACCCCTTGCG
GTCACAGGCC ATGTGCCGCC CTATATCGCC GCCCTTGGCA TGTCATTAAG CTCCATTCTG
GTCGTCAGCA ACAGCCTGCG ACTCCTTAGG ATAAAATTAT GA
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| Protein sequence | MNRCFHCAEP FIQVPLYTQI NGTAQPMCCP GCQAVSQAIM DAGLMSYYQY RSEPGMKQTG
LVPEQLSHFS AYDLAEVQQD FVHQQDILST TSLTITGMSC AACAWLIEHR LSPIEGIAKV
LVNSTTQRAM ISWDNSQVKL SEILTQISQI GYQAAPYQQD EQEKQHHKDS RTFLLRLGLA
GFATMQVMMF ALALYTGYFR DLDEAIRDYF RWVSMIFAAP VVLYSAQPFY FSALRSLLSG
KLNMDVSVSI AIGGAFTASC VATINGTGEV YFESVSMFTF FLLLGRYFEQ NARRRASISS
NNLHKLVPLT ALRLDGNQQT EIPAKSLRLG DIILVRPGDA FAADGVVIDG SSSANEAMLT
GEQMPVDKNL DCPVFAGTLN VEQPLQVRVT ALGQDQLVAE IIRLQEIAAA NKPAIAFMVD
KLARYFSATI LTTALITYLV WLQISPDDAF WVTLSVLVAT CPCALALATP TAVTCATAIF
TRLGIITRKA GVFEKLASIE QVVFDKTGTL TRGHIALGAL SIIDPQQNKG DVLTEKQMLA
IAAALEAGSL HPIALAFSRH YDPNVIATEI AHFVAQGIEG KVQGQVYRIG VKAFVQGNMS
LTASDSQTTD NTKPTPDTSP CVWLSQNGRL IASIPIQDEV RSDAKQAVEA LQQANIQVCI
ASGDSLSHVN ALGHTLGIHQ VYAEQKPQDK LTLINQLQLS HNTAMFGDGI NDAPVLAGAY
LSVAMGSGSA IAKNSADLIL LGDHLSRFND AIKVAKKANA IIKQNLFWAF GYNLLILPLA
VTGHVPPYIA ALGMSLSSIL VVSNSLRLLR IKL
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