Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1843 |
Symbol | |
ID | 4018326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2169991 |
End bp | 2170743 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637955860 |
Product | fumarate/nitrate reduction transcriptional regulator |
Protein accession | YP_562850 |
Protein GI | 91793199 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0177159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATGA TAGTGACTTC AAAAAAATCG AGCCGCAATG CTAACTCAGG CTGCGCTATA CATTGTAACG ATTGCAGCAT GTCCGAGCTG TGTATCCCGT TCACCCTCAA TGCCAATGAA CTTGAGGAAC TGGATAACAT CATAGAGCGG AAAAAGCCGG TGCAAAAAGG CGATAAACTG TTTCAATCTG GTGATGGCCT TAAGTCCTTG TATGCAATCC GCTCGGGCAC CATCAAGAGT TACACCATTA CTCAGCAAGG TGATGAACAG ATCACGGGTT TTCACTTAGC CGGTGATGTT ATAGGCTTTG ATGCCATTCA TAAACAGGCT CATCAAAGTT TTGCTGAAGC CCTTGAAACC TCGATGATTT GTGAAATTCC TTTCGATACC TTAGATAGCC TAGCCGGCAC TATGCCTAAA CTTAGGCAGC AAATCATGCG CCTGATGAGT CACGAAATTA TCAGCGATCA AGAAATGATT TTATTGCTGT CTAAGAAAAA TGCCGAAGAA CGTCTCGCCG CCTTTATTGC TAAATTAGCC AACCGCTTTG CTAACCGCGG CTTCTCCCCT AATGAGTTTC GCCTCTCCAT GACCCGCGGC GACATAGGTA ATTACCTGGG CTTGACCGTG GAAACCATCA GCCGCTTATT GGGGCGTTTT CAAAAAGCGC AGATGATTGC CGTCAACGGG AAATACATCA CTATTGTTGA TCATCAGGCG CTCAATACAC TGGCCGACCA CACCGAGCAA TAA
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Protein sequence | MDMIVTSKKS SRNANSGCAI HCNDCSMSEL CIPFTLNANE LEELDNIIER KKPVQKGDKL FQSGDGLKSL YAIRSGTIKS YTITQQGDEQ ITGFHLAGDV IGFDAIHKQA HQSFAEALET SMICEIPFDT LDSLAGTMPK LRQQIMRLMS HEIISDQEMI LLLSKKNAEE RLAAFIAKLA NRFANRGFSP NEFRLSMTRG DIGNYLGLTV ETISRLLGRF QKAQMIAVNG KYITIVDHQA LNTLADHTEQ
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