| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1840 |
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| Symbol | |
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| ID | 4018323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2166761 |
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| End bp | 2167507 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955857 |
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| Product | UMP phosphatase |
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| Protein accession | YP_562847 |
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| Protein GI | 91793196 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000453857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAATA TTATTTGTGA TATCGATGGT GTACTACTGC ACGATAACAA GTTAATTCCA
GGCAGTGATA GCTTCATTCA TCGCATTCTT GAACAAGGGA ACCCGTTAGT CATACTCACA
AATTACCCAG TACAAACAGG AAAAGACCTG CAAAATCGCT TGGGGGCCGC GGGTATTAAT
GTCCCCGAGG ATTGTTTTTA TACCTCAGCC ATGGCGACAG CTGATTTTTT GACTCATCAA
GAAGGCAACA AAGCCTATGT GATCGGTGAA GGTGCGCTTA CCCATGAACT GTACAAGGCA
GGTTTTACCC TGACTGATAT TAATCCAGAC TTTGTGATTG TCGGCGAAAC TCGCGCCTAC
AATTGGGATA TGATCCACAA GGCGGCGCAG TTTGTTGCAG GCGGCGCCCG CTTTATTGCC
ACTAACCCTG ATACCCACGG TCCATCCTTC AGCCCAGCTT GCGGCGCCTT ATGTGCCGCC
ATCGAGCGCA TTACCGGAAA GATGCCCTTC TATGTGGGAA AACCTAGCGC TTGGATCATC
CGCTCAGCGC TGAATCACAT TAAAGGCCAC TCGGACAATA CTGTGATCAT AGGTGACAAT
ATGCGCACCG ATATTTTGGC GGGCTTTCAA GCCGGGCTTG AAACCATCTT AGTCACCAGT
GGCGTCAGTC AGCTCAATGA TATTGGCAAA GAGCCGTTTC GCCCTAACCA TGTGTTCGCC
TGCGCAGGAG ACATAGACGT GGTCTAA
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| Protein sequence | MKNIICDIDG VLLHDNKLIP GSDSFIHRIL EQGNPLVILT NYPVQTGKDL QNRLGAAGIN
VPEDCFYTSA MATADFLTHQ EGNKAYVIGE GALTHELYKA GFTLTDINPD FVIVGETRAY
NWDMIHKAAQ FVAGGARFIA TNPDTHGPSF SPACGALCAA IERITGKMPF YVGKPSAWII
RSALNHIKGH SDNTVIIGDN MRTDILAGFQ AGLETILVTS GVSQLNDIGK EPFRPNHVFA
CAGDIDVV
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