| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1808 |
|---|
| Symbol | |
|---|
| ID | 4018290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2134439 |
|---|
| End bp | 2134855 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637955824 |
|---|
| Product | DsrE-like protein |
|---|
| Protein accession | YP_562815 |
|---|
| Protein GI | 91793164 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1553] Uncharacterized conserved protein involved in intracellular sulfur reduction |
|---|
| TIGRFAM ID | [TIGR03012] sulfur relay protein TusD/DsrE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000348316 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTT TTGAGAGACA CAAGGTTATG AGTCAGTTCC TTATCCAAGT CAATGGCGGC
GCCTATGGCA GCACAGGCAG TTTTCGCGCC CTAAAATTTT GCCAAAGCGC CCTAGCTCAA
GGCCATACCA TAGTAGGTGT GTTTTTCTAT CAAGATGGCG TTTACAACAG CAATGCATTG
CTCACGCCGG CATCGGATGA ATTCGATATT CATACCGCCT GGCAAGCTTT GAGTGAAGCG
CATCAGATAA CACTGACTAA TTGCGTCTCA GCCGCTTGGC GCCGTGGGAT TTTATCGCCC
CAAGATGCGT TAGATAATGC TAAGCCCCAA TGGAACGCAG CAACGAGCTT TACCATGGGC
GGTCTGGGCG AGCTGGTGGC GGGCATAGAG CAAGCCGAAC GTCTGGTGTG TTTTTAG
|
|---|
| Protein sequence | MAFFERHKVM SQFLIQVNGG AYGSTGSFRA LKFCQSALAQ GHTIVGVFFY QDGVYNSNAL
LTPASDEFDI HTAWQALSEA HQITLTNCVS AAWRRGILSP QDALDNAKPQ WNAATSFTMG
GLGELVAGIE QAERLVCF
|
|---|
| |