| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1807 |
|---|
| Symbol | |
|---|
| ID | 4018289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2134023 |
|---|
| End bp | 2134379 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637955823 |
|---|
| Product | DsrE-like protein |
|---|
| Protein accession | YP_562814 |
|---|
| Protein GI | 91793163 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2923] Uncharacterized protein involved in the oxidation of intracellular sulfur |
|---|
| TIGRFAM ID | [TIGR03010] sulfur relay protein TusC/DsrF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000142115 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA TCACCATCAT ATTTAGAAAA AGCCCCATAG GCACGAGTAG CGCCCGAGAG
GGATTAGATT TTGCCTTGCT AAGCGCAAGC TTTGAGCAAG AAGTGAGCCT AGTCTTCACC
ATGGAGGCGG TGCTGCACCT TTTGCCATCT CAAAATCCTG AACTTAGCGG TAGCAAAGAC
TATATTGCCG CGTTAAAAGC CCTGAGCTTG TATGACATAG ACACCGTGTT AGTGTGCCAA
GCATCGCTCA AGGCCCTAGG TTTACGCAAT GAGCAACTGG CCATCCATGC CACTGCTGCC
AGCTTTGATG ACATAAAAGC CTTAATTAAT CATGCCGATG AGATAATGGT CTACTGA
|
|---|
| Protein sequence | MKRITIIFRK SPIGTSSARE GLDFALLSAS FEQEVSLVFT MEAVLHLLPS QNPELSGSKD
YIAALKALSL YDIDTVLVCQ ASLKALGLRN EQLAIHATAA SFDDIKALIN HADEIMVY
|
|---|
| |