Gene Sden_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1799 
Symbol 
ID4018281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2126555 
End bp2127133 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content46% 
IMG OID637955815 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_562806 
Protein GI91793155 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.2438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAC GTGTGCTGGT GTTAGTTGGT AACCCAAAGG ATAAGAGTTT TTCAAATCAT 
CTTGCGAAGG TGTATGTAAA CGCGGCTGAA AAACACTGTG AAGTGCGTTT ATTTCGACTC
TGCGACATGC AGTTCAACCC AGATTTAGCC GTTGGTTACC ATGATAAACA AGCGTTAGAG
CCTTGCCTGC TGGCGTTCCA ACAGGCATTA GTGTGGTCAG AACATCTGGT TATCATCACC
CCCATTTGGT GGGGCGCAAT TCCGGCCAAG CTGAAGGGGC TCTTCGATAG AACATTGTTA
CCTAATTTTG CCTTTAAGTA TCAAGCGGGT AAATCAATCC CGATAAAGTT ACTCAAGGGG
AAAACCTCAA GACTTATCAT GACCATGGAC ACCCCGCCTT GGTATTATTG GCTAGTGCAG
GGCGCGCCAG CGCTCAAGCA ATTAAAAACA GCCACCTTGG CGTTTTGTGG ATTTAAATCG
GTTAAAAGCA ACATGCTTGG GCCAATCATT AACTCAAGCG AGGCCGCAAG AGATAAATGG
ATTAAGGCTA TTGCTCAGTT GGGGCGAGCT GCCGAGTAA
 
Protein sequence
MSKRVLVLVG NPKDKSFSNH LAKVYVNAAE KHCEVRLFRL CDMQFNPDLA VGYHDKQALE 
PCLLAFQQAL VWSEHLVIIT PIWWGAIPAK LKGLFDRTLL PNFAFKYQAG KSIPIKLLKG
KTSRLIMTMD TPPWYYWLVQ GAPALKQLKT ATLAFCGFKS VKSNMLGPII NSSEAARDKW
IKAIAQLGRA AE