Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1798 |
Symbol | |
ID | 4018280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2126099 |
End bp | 2126455 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637955814 |
Product | regulatory protein, MerR |
Protein accession | YP_562805 |
Protein GI | 91793154 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0455207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACATAG GTGAAGTATC AAAAAAAACG TCTCTGTCCA TTAAGGCCAT CCGCTTCTAT GAGGCCAAAG GCTTGATCAA TCCCCCCCAG CGGCTAGGGC GTTATCGGGT TTACCAAGCC GCCGATGTTG ATCTGCTTAT ACTGATTAAA CAAGCGAAGC AATTAGGGGT TAGCTTATCT CAGTTAAAGG GGGTCATAGT CTACCAAGAC GGTAAGCTTG ATTGGTTGAG AATAAAACTG TTTTTGGCGG AGCTTAGAGT GCAGTTGCAG GCAAAAATTG CTGATTTAAC GGCAAATATA GCCAATATTG ATGAATGTAG CCGTCAAATA GACACTGAGC ACAGCCTGAG TGACTGA
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Protein sequence | MYIGEVSKKT SLSIKAIRFY EAKGLINPPQ RLGRYRVYQA ADVDLLILIK QAKQLGVSLS QLKGVIVYQD GKLDWLRIKL FLAELRVQLQ AKIADLTANI ANIDECSRQI DTEHSLSD
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