Gene Sden_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1773 
Symbol 
ID4018252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2097053 
End bp2097271 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content42% 
IMG OID637955786 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_562780 
Protein GI91793129 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGA AAAATATGAT TTCAATACAA GTTAATGGTG AATTTATTCA AGTGAATGAA 
AGCACCAGCC TGGCTCAATT AGTTAGCAGG CAAGCGCTTA ATGCCAAAGG GATTGCCTTG
GTGATCAATG CCGAAGTCGT GCCTCGCAGT CGCTGGCAAC ACACAGTGTG TCAGGATCAA
GATAAAGTTG AGTTTTTTTC TGCTGTTGCA GGAGGTTAA
 
Protein sequence
MNEKNMISIQ VNGEFIQVNE STSLAQLVSR QALNAKGIAL VINAEVVPRS RWQHTVCQDQ 
DKVEFFSAVA GG