Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1756 |
Symbol | |
ID | 4018234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2077261 |
End bp | 2078421 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637955769 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_562763 |
Protein GI | 91793112 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000020151 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAGAGA TCCTCTTTCT GCTATTACCC GTTGCAGCCG CCTATGGTTG GTACATGGGT AGGCGCAGTA TTCGCCAGAG CCAGCATCAA AAACAAAATA AGTTAAGCCG AGACTACTTC ACTGGGCTTA ATTTTCTGCT GTCTAATGAA TCTGATAAAG CCGTTGATTT GTTCATTACC ATGTTGGATG TGGACGATGA AACCATAGAT ACCCATTTGT CCTTAGGTTC GCTGTTTCGA AAGCGCGGTG AAGTTGACCG TTCAATACGT ATTCATCAAA ACTTAATTGC CCGTCCAAGT CTGACCACAG AACAACGTGA TATCGCCATG ATGGAGCTGG GCAAAGATTA TATGGCGGCA GGTTTTTATG ACAGAGCCGA AGAAATCTTT ACTAATTTAG TTAGCCAAGA TGAACACAGT GAAGAGGCTG AAACTCAGCT AATCTCCATC TACCAAATTA CCAAAGAATG GCAAAACGCC ATCGATACCA CTAAACGTTT AAGTCGCAAG CGGCAGCAAT GTTTAAAACC TATCACGGCG CATTTCTATT GCCAGTTAAG TGATGAAGCC ACTACAGAAG AACTGAAGGT AAAGAAACTG CTACAGGCGG TAAAATTAGA CCCCCAATGC GGCCGTGCCT GGTTAAGCCT AAGCAAAATA TATCTCGATA GCGGCAAACA AAGCGAATGT AAACAAAGTC TATACGCCTT ACTAGACGGC GATATTGAAT TGTTTGCCGA TGGTCTGAGC GTCGCCAAGC AAGTATACCG TGATAGCCAA GATGAAAGCG GATATCAACA ACTGCTGCTT AAAGCCATAG AGGCTGGGGC TGGTGTCAGT GTTGTCATCG CCCTGGCTGA ATTAAAGATA GCCCAACAGG ATATTGAAAG CGCCGAAACC TTGGTGCTGG ATAATCTCTA TCGCCATCCG ACCATGAAAG GCTTCCAGCA TTTAATGCAG GCGCATATAA AGCAGGCGGA AGACGGTCAG GCGAAGCAGA GTTTGACTAT GCTTGGGAAG TTAGTGGAAC AACAAATTAA ATATCGTCCT AGTTATCGCT GCCATGCCTG TGGTTTTCCT TCTCATGGAC TCTATTGGCA TTGTCCCTCC TGCAAGCAGT GGGGTAGCAT CAAGCGCATC AAAGGCCTTG ATGGTGAATG A
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Protein sequence | MLEILFLLLP VAAAYGWYMG RRSIRQSQHQ KQNKLSRDYF TGLNFLLSNE SDKAVDLFIT MLDVDDETID THLSLGSLFR KRGEVDRSIR IHQNLIARPS LTTEQRDIAM MELGKDYMAA GFYDRAEEIF TNLVSQDEHS EEAETQLISI YQITKEWQNA IDTTKRLSRK RQQCLKPITA HFYCQLSDEA TTEELKVKKL LQAVKLDPQC GRAWLSLSKI YLDSGKQSEC KQSLYALLDG DIELFADGLS VAKQVYRDSQ DESGYQQLLL KAIEAGAGVS VVIALAELKI AQQDIESAET LVLDNLYRHP TMKGFQHLMQ AHIKQAEDGQ AKQSLTMLGK LVEQQIKYRP SYRCHACGFP SHGLYWHCPS CKQWGSIKRI KGLDGE
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