| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1751 |
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| Symbol | |
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| ID | 4018229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2072489 |
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| End bp | 2073775 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955764 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_562758 |
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| Protein GI | 91793107 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00270264 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAC TGCATCTTGA ACCTATTGCC TGCATCGATG GCGAAATTAA TATTCCTGGC
TCGAAAAGTA TCTCCAATCG AGCGCTGTTA TTGGCAACCT TAGCTAAAGG CACCACCACC
TTAACCAATT TATTAGACTC AGACGATATC CGCTATATGC TGGCATCCCT TGAGCAACTC
GGGGTTCAAT TCGAACTCAG CGACGATAAA ACTCGCTGCA CAGTGCAAGG CATGGGCGGC
GCGGTTTCAG CATCCACTGC GCAAACATTG TTTTTAGGGA ATGCAGGGAC GGCAATGCGG
CCATTGTGTG CAGCATTAAC ATTAGGCCAA GGGGAATTTA CCTTAACTGG CGAGCCCAGA
ATGGAAGAGC GTCCCATAGG CGATTTAGTT GATGCGCTGC GCCAATTGGG CGCCAGCGTG
ACTTACCTTA AAAATGACGG TTTCCCGCCA CTTACCATTA ATGCCACGGG TCTTAATGGC
GGCGATGTGG ATATCGCGGG GGACTTATCC AGTCAGTTTC TTACTGCACT CTTAATGGTG
GCGCCACTAG CTAAGGGCAA AGTGAACATC AATATTAAAG GTGAGCTAGT GTCAAAGCCT
TATATCGACA TCACCTTAGC CCTTATGGCG CAGTTTGGCG TTGACGTGCA AAACCATGAT
TATGCTCGCT TTGAAATTAA CCCAGGGCAG CAATACCTGT CACCGGGCAA AGTATTGGTG
GAAGGGGATG CCTCATCGGC CTCTTACTTT TTAGCGGCAG GCGCTATCGC AGGTGGTAGT
GTCAAAGTCA CAGGCGTGGG CCGTTTAAGC ATTCAAGGTG ATGTGAAATT TGCCGATGCC
CTTGAGAAAA TGGGCGCGGA TATTGAATGG GGTGATGATT TTATTATTGC CCGCAGTGCT
AAATTATCCG GCATTGATAT GGACATGAAC CATATCCCAG ATGCGGCTAT GACTATCGCT
ACTGCGGCAT TATTTGCCGA GGGGGAGACC TGTCTTCGCA ATATTTATAA TTGGCGTATC
AAGGAAACAG ATCGCTTACA TGCCATGGCA ACAGAGCTTA GAAAAGTAGG TGCGGTAGTT
GAAGAAGGTC ATGACTTTAT TCGCATTACT CCGCCAGTGA AGATGAATAC TGCTGCCATT
GATACCTATA ACGACCATCG CATGGCCATG TGTTTTTCGC TACTGGCGTT TGCGGATTGC
GGCATCACAA TTAATGATCC CGACTGCACC TCAAAAACCT TTCCCAGTTA TTTCGCCGAG
TTCGCCCGCT TGACTCAAGA GGCTTAA
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| Protein sequence | MKQLHLEPIA CIDGEINIPG SKSISNRALL LATLAKGTTT LTNLLDSDDI RYMLASLEQL
GVQFELSDDK TRCTVQGMGG AVSASTAQTL FLGNAGTAMR PLCAALTLGQ GEFTLTGEPR
MEERPIGDLV DALRQLGASV TYLKNDGFPP LTINATGLNG GDVDIAGDLS SQFLTALLMV
APLAKGKVNI NIKGELVSKP YIDITLALMA QFGVDVQNHD YARFEINPGQ QYLSPGKVLV
EGDASSASYF LAAGAIAGGS VKVTGVGRLS IQGDVKFADA LEKMGADIEW GDDFIIARSA
KLSGIDMDMN HIPDAAMTIA TAALFAEGET CLRNIYNWRI KETDRLHAMA TELRKVGAVV
EEGHDFIRIT PPVKMNTAAI DTYNDHRMAM CFSLLAFADC GITINDPDCT SKTFPSYFAE
FARLTQEA
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