| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1738 |
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| Symbol | |
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| ID | 4018216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2052850 |
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| End bp | 2055945 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955751 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_562745 |
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| Protein GI | 91793094 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0173564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTTA CCGACTTATC TGTAAAGCGG CCGGTGTTTG CCTCTGTCAT CAGTATTTTA
CTTATCGTAC TTGGGTTAGT GGCATTCGAT AAATTGCCGT TAAGGGAGTA TCCCAATATC
GATCCGCCCA TAGTGTCCAT AGAAACCAGC TATCGCGGCG CCAGTGCCTC AGTGGTCGAG
AGCCGCATCA CCCAGCTTAT CGAAGACAGG TTAAGTGGCG TAGAAGGTAT ACGTCATGTG
AGTTCATCCA GCAGCGATGG CCGCTCCTCT GTGACATTGG AATTTGAAAT TACCCGCGAT
ATTGAAGCCG CAGCCAACGA CGTGCGCGAC CGAATCTCTG GGTTATTAGA CAGATTGCCC
GATGAGGCTG ACACGCCTGC TATCTATAAG GCCAATGGCG GCGACGAAGT CATTATGTGG
CTTAATCTGG TGTCCGATCA GATGTCCACC TTAGAGCTTA CCGATTACGC TAGCCGCTAC
TTAGTTGACC GATTTTCGGT TATCGATGGC GTAGCGCAAA TCCATGTGGG CGGCGGTAAA
GTATACGCCA TGCGCATTTG GGTCGACAGA GAAGCCTTAG CCTCACGTAA TTTGACCGTT
GCAGACGTGG AAGCCGCATT GCGTTCAGAA AACGTCGAGT TGCCAGCGGG CTCTATCGAA
TCAAAAGAGC GTCACTTTAC CTTAAGGGTA GAGCGCAGCT TTAGAACCGA AACCGATTTT
GCCAACTTGG TCATTGCCCA TGGGGATGAC GGCTACCTGG TGCGCCTAGG GGATGTGGCC
AAGGTAGAGA TCGGCTCAGA AGAAGAGCGC ATTATCTTTC GGGGTAATAA AGAATCCATG
ATAGGGATAG GGATCACCAA GCAATCTACC GCGAATACCT TAGATGTTGC CAGAGCGGCG
AATGAGCTTG TTGATGAGAT AAACCCAACA TTGCCAGCGG GCATGGAAAT CAAGCGCTCT
TATGATAGCT CGGTATTTAT CGAAGCCTCT ATCGATGAAG TGTACCAAAC CCTATTCTTG
GCAATAATTC TCGTTATCAT AGTCATTTAT CTGTTTTTGG GTAGCGTGCG GGCCATGCTT
ATCCCCGCCA TTACCGTACC CGTGTCATTA CTTGCTACTT TTATTGTGCT GTATGCCTTA
GGTTACACCA TTAATTTGTT GACACTATTG GCCATGATCT TAGCCATAGG CATGGTGGTG
GATGATGCCA TTGTGATGCT GGAGAATATT CATCGCCGCA TCGAACAGGG AGATTCGCCT
TTAAAAGCGG CGTTCTTGGG CGCAAGAGAA GTGGCCTTTG CCGTGGTTGC CACGACTTTA
GTGCTGGTGG CTGTATTTAT GCCAATCACC TTCCTTGAAG GTGATATCGG TAAATTATTT
AAAGAATTTG CTGTCACCAT GAGTGCGGCA GTGATGTTTT CCAGCATAGT GGCACTGACG
TTAACCCCTA TGATGTGCTC TAAGTTATTA AAGCCTGCTG GGGAAGACCC TTGGTTGGTG
CGTCAAGTGG ACAAGGGCAT GACGCGCTTA AGTCAAGCTT ACGAGCGTAC CTTAACCCAG
GCATTTAAAC GCCCGTTTCT GGTGTCGCTG ATCATTATCA CCGCCTTTGG GTTGAGCGCC
TTCTTGCTTA AACAAGTGCC GCAGGAATTT GCCCCTCAAG AAGACAGAGG TTCGATGTTC
TTAATGGTGA ATGGCCCTCA AGGCGCGAGC TTTGAATACA TAGAAAAATA CATGGATGAA
GTGGAAGGGC GCCTAATGCC ACTAGTGGCC AGTGGCGATA TTAAGCGTTT GCTTATTCGT
GCTCCGCGTG GGTTTGGCCG CGCCGCAGAC TTCTCCAACG GCATGGCAAT AATCGTGCTT
GAAGATTGGA GTAGTCGCAG GCCGGCTGGG GTGATTATCA ATGATATTCG TAGCCGCTTA
GAAGATTTAG CCGGCATTCG TGCTTTCCCT ATAATGCGTC AAGCCTTTGG CCGTGGGGTA
GGGAAACCCG TGCAATTTGT ATTGGGCGGT CCAAGTTACC CAGAGCTTGC TCAGTGGCGC
GACACCATGC TTGAAAAAGC CAAGGAAAAT CCAAACTTGG TGGGCCTAGA TCATGATTAT
CAAGAAACCA AACCGCAGCT TAGGGTCATC ATAGACAGGG ACAGGGCAGC AGCGCTTGGA
GTTTCCATTT CCCACATTGG CCGTACGCTA GAGTCCATGT TAGGTTCTCG CTTAGTGACC
ACCTTCATGC GTGATGGTGA AGAGTATGAT GTGGTTATTG AAGGCGATCG CGATAAGCAC
AATACCGCAG GGGATCTGAG TAACATACAT GTCCGCTCAG ACAGAAGTGA TGTGTTAATT
CCATTATCGA ATTTGGTCAC AGTGGAAGAG TTTGCCGATG CGAGCTCATT AAACCGTTAT
AACCGCATGC GAGCCATTAC CTTGGAAGCC AACTTAGCGG ACGGCTACAG CTTAGGGGAA
GCACTGGATT ATCTTAATGG CATAGCCGCA GCTTATCTTC CAGCCGAGGC CGTCATTAGC
TATAAAGGGC CTTCCCTTGA TTATCAAAGC TCAGGTAGCT CGATGAATTT TGTGTTCGTG
TTGGCACTTG GGATCGTTTT CTTGGTGCTT GCGGCCCAGT TTGAAAGTTA TATTCATCCT
ATGGTCATCA TGCTGACTGT GCCCTTGGCC ACCTTAGGTG CATTGTTGGG ACTGTGGCTC
ACAGGGCAAA GCCTTAACAT TTACAGTCAA ATTGGCATCA TAATGTTAGT GGGGCTTGCT
GCAAAGAATG GCATTTTAAT CGTTGAATTT GCCAATCAAT TGCGCGACCG TGGACTTGAG
TTTCAACAGG CTATTTTACA AGCATCAAGT CAGCGATTAA GACCTATATT GATGACGGGC
ATCACCACGG CGGCAGGTGC TATTCCGTTA GTGATGGCCA GTGGCGCGGG CGCAGAGACA
CGTTTTGTTA TCGGTGTGGT GGTGATAAGC GGCATTCTGT TGGCAACATT CTTCACCTTA
GTAGTGATCC CTGTGGCCTA TAACTTGTTT GCCCGTCACA CTAATTCGCC CGACACTGTG
GCTAAACAGC TAGAGAAAGA GCTGTCTGAG GATTAG
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| Protein sequence | MILTDLSVKR PVFASVISIL LIVLGLVAFD KLPLREYPNI DPPIVSIETS YRGASASVVE
SRITQLIEDR LSGVEGIRHV SSSSSDGRSS VTLEFEITRD IEAAANDVRD RISGLLDRLP
DEADTPAIYK ANGGDEVIMW LNLVSDQMST LELTDYASRY LVDRFSVIDG VAQIHVGGGK
VYAMRIWVDR EALASRNLTV ADVEAALRSE NVELPAGSIE SKERHFTLRV ERSFRTETDF
ANLVIAHGDD GYLVRLGDVA KVEIGSEEER IIFRGNKESM IGIGITKQST ANTLDVARAA
NELVDEINPT LPAGMEIKRS YDSSVFIEAS IDEVYQTLFL AIILVIIVIY LFLGSVRAML
IPAITVPVSL LATFIVLYAL GYTINLLTLL AMILAIGMVV DDAIVMLENI HRRIEQGDSP
LKAAFLGARE VAFAVVATTL VLVAVFMPIT FLEGDIGKLF KEFAVTMSAA VMFSSIVALT
LTPMMCSKLL KPAGEDPWLV RQVDKGMTRL SQAYERTLTQ AFKRPFLVSL IIITAFGLSA
FLLKQVPQEF APQEDRGSMF LMVNGPQGAS FEYIEKYMDE VEGRLMPLVA SGDIKRLLIR
APRGFGRAAD FSNGMAIIVL EDWSSRRPAG VIINDIRSRL EDLAGIRAFP IMRQAFGRGV
GKPVQFVLGG PSYPELAQWR DTMLEKAKEN PNLVGLDHDY QETKPQLRVI IDRDRAAALG
VSISHIGRTL ESMLGSRLVT TFMRDGEEYD VVIEGDRDKH NTAGDLSNIH VRSDRSDVLI
PLSNLVTVEE FADASSLNRY NRMRAITLEA NLADGYSLGE ALDYLNGIAA AYLPAEAVIS
YKGPSLDYQS SGSSMNFVFV LALGIVFLVL AAQFESYIHP MVIMLTVPLA TLGALLGLWL
TGQSLNIYSQ IGIIMLVGLA AKNGILIVEF ANQLRDRGLE FQQAILQASS QRLRPILMTG
ITTAAGAIPL VMASGAGAET RFVIGVVVIS GILLATFFTL VVIPVAYNLF ARHTNSPDTV
AKQLEKELSE D
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