Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1736 |
Symbol | |
ID | 4018214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2050437 |
End bp | 2051555 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637955749 |
Product | NlpBDapX lipoprotein |
Protein accession | YP_562743 |
Protein GI | 91793092 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3317] Uncharacterized lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000422629 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGTAA AAGAAAAATT AAAACAAATT ACCCCAATAC TTTTGGTTGC GGCAGTCTCA GCAGCCTGCA GTTCACCTAT CGATCGCCGT CAAGTGAATG GCACAGATGA ATACATTAAT GCAGAAGTGA CGCCTGGACT TAACATTCCA GCTAGCCTAA CTACACCGCC ATACACTAAA GAGTATGAAA TCCCTCCTGT AGGCACTAAG GCAAATACGG CTATTGTGGG TAAAAAACTT GATATCCGTG CGCCACTGCA AGTCTTGCCT ATGGCAGAAG GCACTCGAGT TGAAGAGAAT AGTGACAATA TCCGCGTGGT TATTGAGTCT ATCGATAACA GCATGGATCT GCAGCAAGAG ATCTTTGACA CCATTCGCGG TTCACTGATT GACTCAGGCA TTACTGTCTT GGTTGAAAAT ACCAATGAAG GCTTTATTGA AACCGATTGG ATAACCAGTG AAGAAGTTAT CGAGTCTAAT TGGTGGAGTG CCGATAAGGT GTACCAGTTA CGCCAGCGTT ATCGCTATGA TATCGCCATT AAGCCCCATG GCCGCACTGC TGATGTCACC ATCAATCTGA TTGAGCATGA AGAACATTAT AACGGTGAAA ACCAAGGCGT GTTGCTCAGT GGTGAAGATA AACGCCGCTA CACCATCGAC AGACTGAACA GCAGCGTAGC TTACATGAGT GCTAAGCGTG AGCAGTTACT CAAAGAAAAC CGTTTACGCC AAAGCCGCGG CATCGACCTT CAGCTTATCG CTGCGCAGGG TAAAGAAGGC GCGTACTGGT TAGCCGATGG AAAGTTTAAG CAAGTGTGGG ACAGATTGCG TATCGTGTTA CCTGAGCTTG GGTTTGACGT ACTGGATATG GACATGAACA AAGGTCTGTA TTATGTCAAT CTAGAAGAAA GTGGCGGTTT CTGGAGCTCG CTCTGGGGCG ATGAAAGCCT AGCGCTTGAT AAAGGCAACT ACCGAGTGGT GTTAACGGCC AGCGATGATA CTAATAAGAC TAACATCTAT CTGAAAGACG TGGCTGGTGA GCCTGTTGAT GATGAAGTCA TGGCTCAAGT ATTCAAGAGT TTTGCTGATC TGATGCAAAC GGATCGTAAA GTACGTTAA
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Protein sequence | MLVKEKLKQI TPILLVAAVS AACSSPIDRR QVNGTDEYIN AEVTPGLNIP ASLTTPPYTK EYEIPPVGTK ANTAIVGKKL DIRAPLQVLP MAEGTRVEEN SDNIRVVIES IDNSMDLQQE IFDTIRGSLI DSGITVLVEN TNEGFIETDW ITSEEVIESN WWSADKVYQL RQRYRYDIAI KPHGRTADVT INLIEHEEHY NGENQGVLLS GEDKRRYTID RLNSSVAYMS AKREQLLKEN RLRQSRGIDL QLIAAQGKEG AYWLADGKFK QVWDRLRIVL PELGFDVLDM DMNKGLYYVN LEESGGFWSS LWGDESLALD KGNYRVVLTA SDDTNKTNIY LKDVAGEPVD DEVMAQVFKS FADLMQTDRK VR
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