| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1722 |
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| Symbol | |
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| ID | 4018200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2026144 |
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| End bp | 2028195 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955735 |
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| Product | carboxy-terminal protease |
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| Protein accession | YP_562729 |
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| Protein GI | 91793078 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000352033 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAAC TTACCTTAGC CGTGTCGATT GCCGCTTTGT TTGCTGGATT ACCAGCGTGG
GCATTTGAAC CAGCGATTCA AATCAGCGAG TTACCCAGCC TGTCTCAGGA GCCACAGCAT
AAAGTGGCGA GCAAGCGCGT AGCCGGCTTA TTTACTCGTT CGCATTATCA TAGATTTTCC
CTCGATGATG CGTTTTCTGA ACATATCTTT GACTTGTATA TAGAGCAGCT CGACTATCGT
CGCAATGTGA TGACTCAAGC TGATGTGGAC AGTTTCTCCC AATACCGACA TGAATTTGAT
GACATGGTGA CCAGTGGCGA GCTAGCACCA GCGTTTAAGA TGTTCGATAT GTTGCAAAAA
CGCCGCTATG AACGTTTTGC CTATGCATTG AGTTTGCTAG ATAAAGACAA GCCTTTTGAT
TTCACCTTGG CTGACGACAA ATATCAATTT GATCGTGAAG ATGCGCCATG GGCTAAAAAT
GACGCTGAGT TAAATGAGCT TTGGCGGCAA CGGGTGAAAT ACGATGCGCT TAACCTTAAA
CTTACCGGTA AAGAATGGCC CGATATTGTC GACGTATTGC AGAAACGATA TAACAATGCT
ATCAAGCGTT TAAGTCAAAC TCATAGCGAA GATGTATTTC AAGCGGTAAT GAATGCCTTC
GCTCGTAGCG TTGAGCCACA CACTAGCTAT TTATCGCCAC GTAATGCAGA ACGCTTCCAA
ATGGAAATGA ATCTAAGCCT TGAGGGCATA GGCGCAGTAT TGCAAATGGA TGATGATTAT
ACCGTCATTA AAAGTTTGGT GGCTGGCGGA CCTGCGGCCT TAAGTGAAAA ACTGTCACCT
GAAGATAAAA TCATAGGTGT CGGCCAAAAA GGCAAAGAAA TTGTCGATGT TATTGGTTGG
CGATTAGATG ACGTGGTGGA ACTCATCAAG GGCCCTAAGG GCAGCGAAGT AGTGCTGCAA
ATTTTGCCTA ATAAAGGCGG CGCTAACGCT AAAACCTTTG AAGTCATGAT AACCCGCGAC
AAAATTCGCC TTGAAGACAG GGCGGCAACC TCTAAGATTA TTGAACCTAC TGAGGGTGAA
TACGCCAATC GTAAAGTGGG TGTTATTCAG ATCCCAGGTT TTTACATGAA CCTGTCTCAG
GATGTGACCA AAGAATTGGC TAAGCTCAAC GAAGCTAAAG TTGAAGGTGT AGTCGTCGAC
TTACGGGGCA ATGGCGGCGG TGCATTAACC GAAGCCTCGT TATTAACCGG CTTGTTTATC
GACCAAGGTC CAGTGGTGCA AATTCGTGAT GCCAATGGGC GTATTAATCC CAATGGTGAT
AACGACGGCG TGACTGTCTA CGATGGTCCG CTGACCGTGA TGGTTGATAG ATACAGTGCC
TCAGCATCTG AGATTTTTGC CGCAGCATTA CAAGATTACA AGCGTGCCTT GGTTGTCGGT
GAGTCTACCT TCGGTAAAGG CACAGTACAG CAGCATAAGA GTCTTGGCCG TATTTATGAC
ATGTACGACA AGCCAATAGG CCACGTGCAA TACACCATAG CCAAGTTTTA CCGCATCAAT
GGCGGCAGTA CACAGCTTAA AGGGGTAACG CCAGATCTCG CCTTCCCTAG TGCCTTAAAT
GCCGGTGAAT ACGGTGAGTC TGAGCAGAAG TATGCCTTAC CTTGGGATAA AGTACCGGTC
GCTAAGTACT CGACGTTAGA TCAGGTGAAT TCAGAGTTGG TGAATGTACT GCATACTAAA
CATCAAGGCC GTGTCAGTAA AAATGTTGAG TTTGGTTATA TTTATCAAGA TATTGCTGAA
TATAAAAAAC ATCATGAAGA CACCACCATT TCTTTGGTTG AAAGTGAGCG TTTAGCTTCA
CGTGCCGAAG ATGATAAACG CTTGTTAGAC AGAACCAATG AACGTCGCGT CAAGTTAGGT
AAAAAAGCCG TTGCCTCTAT GGATGACATC GAAGATGACA TAGTCGCTCC AGATGCGTTT
TTAGATGAAA CTGTCTACAT TACGTTAGAC ATGGTGGATT CAGCAAAAGT CGCTAATAAC
AACGTGAAAT AA
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| Protein sequence | MGKLTLAVSI AALFAGLPAW AFEPAIQISE LPSLSQEPQH KVASKRVAGL FTRSHYHRFS
LDDAFSEHIF DLYIEQLDYR RNVMTQADVD SFSQYRHEFD DMVTSGELAP AFKMFDMLQK
RRYERFAYAL SLLDKDKPFD FTLADDKYQF DREDAPWAKN DAELNELWRQ RVKYDALNLK
LTGKEWPDIV DVLQKRYNNA IKRLSQTHSE DVFQAVMNAF ARSVEPHTSY LSPRNAERFQ
MEMNLSLEGI GAVLQMDDDY TVIKSLVAGG PAALSEKLSP EDKIIGVGQK GKEIVDVIGW
RLDDVVELIK GPKGSEVVLQ ILPNKGGANA KTFEVMITRD KIRLEDRAAT SKIIEPTEGE
YANRKVGVIQ IPGFYMNLSQ DVTKELAKLN EAKVEGVVVD LRGNGGGALT EASLLTGLFI
DQGPVVQIRD ANGRINPNGD NDGVTVYDGP LTVMVDRYSA SASEIFAAAL QDYKRALVVG
ESTFGKGTVQ QHKSLGRIYD MYDKPIGHVQ YTIAKFYRIN GGSTQLKGVT PDLAFPSALN
AGEYGESEQK YALPWDKVPV AKYSTLDQVN SELVNVLHTK HQGRVSKNVE FGYIYQDIAE
YKKHHEDTTI SLVESERLAS RAEDDKRLLD RTNERRVKLG KKAVASMDDI EDDIVAPDAF
LDETVYITLD MVDSAKVANN NVK
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