| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1721 |
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| Symbol | |
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| ID | 4018199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2025433 |
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| End bp | 2026119 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637955734 |
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| Product | putative solute/DNA competence effector |
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| Protein accession | YP_562728 |
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| Protein GI | 91793077 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000511987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACT GCAGGCAGCA AGTTTTGCCT AAGGTCCCCT TATTTAACGT GGAAGTAAAA
ATGGAATCAA CAGACAAGTT GACCGACACC AACGCAATTT TAGCGTATTT ATACGAAACA
TTTCCTTTAT GCTTTATTGC AGAGGGCGAG ACTAAACCAT TAAAAATCGG TTTGTTTCAA
GACTTAGCTG AAAAGTTGGC TGATGATTCT AAAGTCAGTA AGACACAACT TAGGGTTGCA
CTGCGTCGTT ATACTAGCAG CTGGCGTTAC CTTAAAGGCG TTAAGCCTGG CGCTCAACGT
ATTGATTTAA ATGGTGTTGA GTGTGGTGAG TTAGAGCAAG AGCATATAGA TCATGCTCAA
GCGACACTCA AAGAAAGCCA AGAAAAAGCC AAGGCAAAGC GTTTAGCTGT AGCTGCTAAA
AACCCAGCTA AAAAGCCTGC CAGACCGGCT AAAAAAGCCG CCGCTAAACC ACAGGTTAAG
AAAGAGCGAG CGCCCGCAAA AGTGGCGCCA GTGGTTGAGC TGGTTCCTGC TAAACTTGAA
GAACTTAAGC AAAAGCAGCG CGTTAATATA AAATTAGGTC AAAACCCAGT TTCAGGTGTG
ATTACTGATA TTAATAAAGA AGATGTGCAT GTTCAGCTAG ACACTGGCTT AACTGTCAAG
GTACGTGTTG AGCACATATT ATTATAA
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| Protein sequence | MNDCRQQVLP KVPLFNVEVK MESTDKLTDT NAILAYLYET FPLCFIAEGE TKPLKIGLFQ
DLAEKLADDS KVSKTQLRVA LRRYTSSWRY LKGVKPGAQR IDLNGVECGE LEQEHIDHAQ
ATLKESQEKA KAKRLAVAAK NPAKKPARPA KKAAAKPQVK KERAPAKVAP VVELVPAKLE
ELKQKQRVNI KLGQNPVSGV ITDINKEDVH VQLDTGLTVK VRVEHILL
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