Gene Sden_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1718 
Symbol 
ID4018196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp2023552 
End bp2024181 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content46% 
IMG OID637955731 
Productparaquat-inducible protein A 
Protein accessionYP_562725 
Protein GI91793074 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0000000634197 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAA CTCGTGAACC TAATGGTGTA GTCCTGTGCC GCTCTTGCGA CTTAGCGGTT 
CGCAAGCGTG CATTACCCTC TAGCGTAAGG GCCCTGTGCC CTCGCTGTCA TACCGTGCTG 
TATGATGCCC CCTATTGTTC ACTCAATGGC ATGCTAGCCC TTTGCATTAC CGCGCTAGTT 
TTTTATATTC CTGCCAATTT ATTGCCTGTA CTTGAAATAC AATTTTTAGG TAGTGTGCGC 
ACAACGACTG TGCTGCAAGC CGCGCTTTCG GTTTGGGCGC AAGGTTATTG GGTGGTGGGT 
CTTGCGGTAT TGGCCGCGGC AGTGGTGGCC CCTGGCCTGC TCATTTTATC CATATTAAGC 
CAAATTCTTA TTATCAAGTT CAACTTTACA GGGCAATTTT GGCAAGGAGT CTACAAGCTA 
CTATTAAGGC ACCATGGCAT GATTTCTCAG ATGACCATGC TGGAGATTTA TGTGATAAGT 
TTTTTAGTCT CTGCTTTTCA GCTGTCAGAT TTTGCCGATA TCTTTTTCGG TTTCGGCACC 
TTTTGCTTCA CTATGCTGTT CTTGGTTGCC TTGTTTTTGC AACGTGAATA CAGCCTAGAA 
CATATGTGGA GTCTCACTCA TGGACAATGA
 
Protein sequence
MQETREPNGV VLCRSCDLAV RKRALPSSVR ALCPRCHTVL YDAPYCSLNG MLALCITALV 
FYIPANLLPV LEIQFLGSVR TTTVLQAALS VWAQGYWVVG LAVLAAAVVA PGLLILSILS 
QILIIKFNFT GQFWQGVYKL LLRHHGMISQ MTMLEIYVIS FLVSAFQLSD FADIFFGFGT 
FCFTMLFLVA LFLQREYSLE HMWSLTHGQ