| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1713 |
|---|
| Symbol | |
|---|
| ID | 4018191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2016731 |
|---|
| End bp | 2017684 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637955726 |
|---|
| Product | thioredoxin reductase |
|---|
| Protein accession | YP_562720 |
|---|
| Protein GI | 91793069 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000742143 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAG CTCGTCATAG TAACCTTCTA ATCTTAGGTT CAGGCCCTGC TGGTTACACC
GCTGCGGTTT ACGCTGCACG CGCAAATTTA AAGCCTGTGA TGATCACAGG GATGCAGCAA
GGTGGTCAAT TGACAACCAC CACCGAAGTC GAAAACTGGC CAGGTGATGC CGATGACTTA
ACAGGTCCTG CATTAATGGA GCGCATGCAA AAGCACGCCG AAAAATTTGA TACCGAAATC
CTGTTCGATC ACATCAATGA AGTCACACTG ACTGAGCGCC CGTTTCGCCT AAAAGGTGAC
AACGGTGAAT ACACTTGTGA TGCTTTAATC ATTGCAACGG GGGCATCTGC TAAATACCTA
GGCTTGCCTT CGGAAGAAGC CTTCATGGGC CGCGGTGTTT CAGCTTGTGC AACCTGTGAT
GGTTTTTTCT ATCGCAACCA GAAGGTTGCT GTAGTAGGCG GTGGCAACAC TGCCGTTGAA
GAAGCCTTGT ATTTGAGCAA TATCGCTTCA GAAGTGCATT TAATTCACCG CCGCGACAGC
TTTCGCTCTG AAAAAATATT AATCGACCGC TTAATGGATA AAGTGGCGAA CGGTAATATT
ATTCTTCATT TAGACAGTAC TCTAGAAGAA GTGACTGGTG ATGCCATGGG CGTTACAGGT
CTTAGAAAGA AAAGCACTAA AGATGGCGTA GTCACAGACT TAGCGGTTGC CGGTGTATTC
ATTGCTATCG GTCACAGTCC AAATACAGGC ATATTTGCAG GCCAGCTAGA GATGAAGCAC
GGTTACTTAC AAGTCAACAG CGGTCTTCAA GGCAATGCCA CTCAAACCAG CATAGAAGGT
GTTTACGCTT GTGGTGACGT GATGGATCAA CATTATCGTC AAGCCATCAC TTCTGCAGGT
ACAGGCTGCA TGGCCGCATT AGATGCTGAG CGTTATTTGG ACGCTAAAAA GTAG
|
|---|
| Protein sequence | MSEARHSNLL ILGSGPAGYT AAVYAARANL KPVMITGMQQ GGQLTTTTEV ENWPGDADDL
TGPALMERMQ KHAEKFDTEI LFDHINEVTL TERPFRLKGD NGEYTCDALI IATGASAKYL
GLPSEEAFMG RGVSACATCD GFFYRNQKVA VVGGGNTAVE EALYLSNIAS EVHLIHRRDS
FRSEKILIDR LMDKVANGNI ILHLDSTLEE VTGDAMGVTG LRKKSTKDGV VTDLAVAGVF
IAIGHSPNTG IFAGQLEMKH GYLQVNSGLQ GNATQTSIEG VYACGDVMDQ HYRQAITSAG
TGCMAALDAE RYLDAKK
|
|---|
| |