| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1702 |
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| Symbol | |
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| ID | 4018180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2004366 |
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| End bp | 2005727 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955715 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_562709 |
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| Protein GI | 91793058 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.125502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATA CAGGTTTTCA GGTTAAACGC TTAATTCAAT TAGCCCTGCC GGTGCTTATC
GCACAAGTGA CTCAAACCAT GATGGGCTTT ATCGATACCG TCATGGCAGG CCGTGTCGGT
GCTGTGGATA TGGCGGCCGT AGCAGTGGCG ACTAGCCTGT GGTTACCCGC TATTTTATTT
GTTCAAGGGC TGTTGATGGC CTTTACCCCC GTGTTCTCTC AGCATCATGG TGCTGATAAT
CAGCAAGCCA TACCTAAATT AATGTTTCAA GCGGGTTACA TAGGCCTGAT TGGCGCTGTG
GGGGTGATGG TATTTCTCGC CTTTTCTGGT TATCTGTTAC ATTTTATGAA ATTAGAGCCT
AACTTACATG ACCTTACTGT CGGTTACTTA GATGCAATCC TCTGGGGCGC CCCGGCATTT
ATCTTGTATC AAGTCCTAAG AGGCTGCAGC GAAGGTATTT CCTATACCAT GCCTACCATG
GTGATAGGTT TTATTGGACT CGGGGTTAAC ATTCCTGCCA ATTATATCTT CATCTACGGT
AAGTTAGGTA TGCCAGCCAT GGGCGGGGCC GGTTGCGGTG TCGCTACCGC GCTGGTTTTT
TGGGCCATGT TTATAGCCAT GGTGATTTAC ATGCTAATTG ATAAAAAATT CATTCAACTT
GCTCCCTTTA AAAGATTTTA TGGCCCTAAA TTAAGCAGCA TGTGGTCAAT GACTAAACTG
GGTTTTCCTA TTGCCATGGC GCTGTTCTTT GAAGTCAGCT TATTTGCCAT CATTGCCCTA
TTGTTGGCCC CCCTTGGTGC CAATGTGGTG GCAAGCCATC AAATCGCGCT TAATTTCTCA
TCTATCGTGT TTATGCTGCC TTTATCCATA GGCATTGCCG TGTCAATTCG TATCGGCTAT
TACCTTGGCC GAGAGCAGAC TGACATCGCC GCCTTGGTCG CCAAAGTAGG TCTAGTGTTA
GCCTTGGGAT TATCCTTTGT GACAGCTTTT CTTACCGTCA GTTTCAGGCA AGAAATCGCC
CTCCTGTATA ACGACAATCC AGAAGTGGTC GCCTTAGCAG GCAGTTTGAT GTTCCTCGCC
GCCGTCTATC AGGTGTCTGA TTCTATTCAG GTGGTCGCAG CAGGCGCGCT TCGAGGCTAT
AAAGACACTC GCAGTGCATT TTATATCACC TTGTTCTCTT ACTGGTTTAT CGGTATGGCC
CTAGGGTATG CGCTGGCCTA CACAGACTTA ATAGTACCCT CCATGGGGGC TCACGGGTTC
TGGATAGGGT TAATCGCCGG ACTCACTGTG GCAGCAATAC TGTTTGCGAT ACGCTTAAGG
TACATTCAAA AGAAAGGCAT CATCTTTGTT GAAATAGACT GA
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| Protein sequence | MNDTGFQVKR LIQLALPVLI AQVTQTMMGF IDTVMAGRVG AVDMAAVAVA TSLWLPAILF
VQGLLMAFTP VFSQHHGADN QQAIPKLMFQ AGYIGLIGAV GVMVFLAFSG YLLHFMKLEP
NLHDLTVGYL DAILWGAPAF ILYQVLRGCS EGISYTMPTM VIGFIGLGVN IPANYIFIYG
KLGMPAMGGA GCGVATALVF WAMFIAMVIY MLIDKKFIQL APFKRFYGPK LSSMWSMTKL
GFPIAMALFF EVSLFAIIAL LLAPLGANVV ASHQIALNFS SIVFMLPLSI GIAVSIRIGY
YLGREQTDIA ALVAKVGLVL ALGLSFVTAF LTVSFRQEIA LLYNDNPEVV ALAGSLMFLA
AVYQVSDSIQ VVAAGALRGY KDTRSAFYIT LFSYWFIGMA LGYALAYTDL IVPSMGAHGF
WIGLIAGLTV AAILFAIRLR YIQKKGIIFV EID
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