| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1677 |
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| Symbol | |
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| ID | 4018153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1951093 |
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| End bp | 1951794 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955688 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_562684 |
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| Protein GI | 91793033 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000705959 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACCAG CGTCGACCCG CTTATTAGCC ATTAATGCCG TGAGTAAAGT ATTTCATGAT
GGTGCCTGTG AAACTCAGGT GCTCCATGAG GTGAATTTAA CGGTGCATCG CGGTGAGCAG
CTTGCCATAG TGGGCAGTTC AGGTTCGGGT AAGAGTACCT TACTGCATAT TATGGGCACC
TTAGAAAGCC CAACCTCTGG TACTGTGCTA TTAGAAGGTG AAAATTTACA CCAGCTGTCA
TCCAAGCGCC AAGCGCAAAT TCGTAATCAA GATTTAGGCT TTATTTATCA GTTTCATCAC
CTATTGCCTG AGTTTAGCGC CTTAGAAAAT GTGGCTATGC CGGCGTTTAT TCAAGGTAAG
AATAAAGCTC AAACCTTGGC TGAAGCTAAA GCCCTGTTAG AACGAGTGGG GCTAGGTCAC
AGATTAACCC ATTTACCCTC GCAATTATCC GGCGGTGAGC GCCAACGGGT GGCCATCGCA
AGGGCACTTA TCAATAAACC TAAATTGGTA TTGGCCGATG AACCTACGGG GAATTTAGAC
GCTGTCAGTG GGGAAGCTGT CTACGGACTT ATTCGTGAAC TTGCCGAGCA GCTTGGAACC
GCCTTCGTGG TGGTGACTCA CGATGCCAAC CTTGCCGCCA GAATGGACAG ACAAGTGAAC
ATGAAAGACG GCATCTTATC CCAGAGTGAG ACCCATCGAT GA
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| Protein sequence | MKPASTRLLA INAVSKVFHD GACETQVLHE VNLTVHRGEQ LAIVGSSGSG KSTLLHIMGT
LESPTSGTVL LEGENLHQLS SKRQAQIRNQ DLGFIYQFHH LLPEFSALEN VAMPAFIQGK
NKAQTLAEAK ALLERVGLGH RLTHLPSQLS GGERQRVAIA RALINKPKLV LADEPTGNLD
AVSGEAVYGL IRELAEQLGT AFVVVTHDAN LAARMDRQVN MKDGILSQSE THR
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