Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1629 |
Symbol | minC |
ID | 4018104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1892925 |
End bp | 1893590 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637955639 |
Product | septum formation inhibitor |
Protein accession | YP_562636 |
Protein GI | 91792985 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0850] Septum formation inhibitor |
TIGRFAM ID | [TIGR01222] septum site-determining protein MinC |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000164279 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAC AAAGTCTCGA GTTAAAGGCC ACTTCTTTTA CTCTGTCAGT ACTTCATATT AAAAATCATG ATCTGATTGC ATTAGCTGCA GAACTGGATC AAAAACTGTC TCAAGCGCCG CAATTTTTTA TCGGCGCCCC CTTAGTGATT AATCTCAAAG CCGTTGAGAA ACACTGTCTC GATCTTAGCG CATTAAAAAC CTTGCTTATG GACAGGCAAC TTATTATTGT CGGTATCACA GAGGCAAGCC CAGAATTAAT AGAACAAGCA CGCGCCTTAG GCCTTGCTGT GATTAAATCC GGCAAGCAAG CAACCACTGC GCCACTGCCC CAAAGAGAAA CCAAAGTCGT TAAACAAAAT GTGCGCTCTG GACAACAAAT ATACGCCAAA AATGCTGACT TGGTTATTTT TGGTGCCGTG GGTAATGGCG CAGAAGTTAT CGCCGACGGC AGTATCCATA TTTATGGCGC CCTTAGAGGG AAAGCCATGG CAGGTGCTGC TGGGGATCAC AATAGCGTGA TAATCGCCAA TTCTCTCGAA GCAGAACTCG TGTCTATTTC AGGCCAGTAT TGGTTAGCGG AACATTTACA ACAACACAGT TTAGATAAGC GTGCTTGCAT CCGTCGTGAT GGTGAGTCGT TAATGGTCGA AACATTGCCT CAATAA
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Protein sequence | MSKQSLELKA TSFTLSVLHI KNHDLIALAA ELDQKLSQAP QFFIGAPLVI NLKAVEKHCL DLSALKTLLM DRQLIIVGIT EASPELIEQA RALGLAVIKS GKQATTAPLP QRETKVVKQN VRSGQQIYAK NADLVIFGAV GNGAEVIADG SIHIYGALRG KAMAGAAGDH NSVIIANSLE AELVSISGQY WLAEHLQQHS LDKRACIRRD GESLMVETLP Q
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